Shewanella polaris: FH971_04140
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Entry
FH971_04140 CDS
T06579
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spol
Shewanella polaris
Pathway
spol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FH971_04140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spol03400
]
FH971_04140
Enzymes [BR:
spol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FH971_04140
DNA repair and recombination proteins [BR:
spol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FH971_04140
Prokaryotic type
FH971_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Spo16_N
Motif
Other DBs
NCBI-ProteinID:
QDE30227
UniProt:
A0A4Y5YC77
LinkDB
All DBs
Position
953613..954275
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AA seq
220 aa
AA seq
DB search
MTKHWQEFIQQQQNQVYYQQLQSFITQQRNEGKTIYPPENEVFSAFQLTPLEQVKVVILG
QDPYHGPDQAHGLSFSVKTGIKPPPSLVNIYKELQNDIEGFIVPNHGNLTAWAKQGVLLL
NTVLTVEQGKAHSHAKAGWQAFTDNVLKRLNQQSTPIIFVCWGNYAIKKGQLITASHHHI
LNGPHPSPLSAYRGFFGCGHFSNINRLLLEDGDKPINWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgactaagcattggcaagaatttattcagcaacaacagaaccaagtctattatcagcaa
cttcagtcgtttattacccaacaacgtaatgaggggaaaacgatatacccacctgaaaat
gaggtgttttctgcttttcaattaacaccactagagcaagttaaagtcgtgatattaggc
caagatccatatcatgggccagatcaagctcatgggttatctttttcagtaaaaacaggc
attaaaccaccaccatcattagttaatatttataaagaattacagaatgatattgaaggg
tttatcgtacccaaccatggtaatttgacggcttgggcaaagcagggcgttttactatta
aatacggtgttaacggttgaacaagggaaagctcattctcatgctaaagcgggttggcaa
gcgtttactgataatgtcttgaaacgattaaatcagcaatcaacgccgattatatttgtg
tgttgggggaattatgcgattaaaaaaggccagctgattacagcatctcatcaccatatt
ctgaatggcccacatccatcgccattatcggcttatcgtggtttttttggttgcggtcat
ttctcaaatataaatcgattattacttgaagatggggataaacctatcaattggcaagtg
taa
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