Sulfitobacter pontiacus: G6548_14020
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Entry
G6548_14020 CDS
T06732
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spot
Sulfitobacter pontiacus
Pathway
spot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G6548_14020 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spot03021
]
G6548_14020 (rpoB)
03400 DNA repair and recombination proteins [BR:
spot03400
]
G6548_14020 (rpoB)
Enzymes [BR:
spot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G6548_14020 (rpoB)
Transcription machinery [BR:
spot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G6548_14020 (rpoB)
DNA repair and recombination proteins [BR:
spot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G6548_14020 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QLL43597
LinkDB
All DBs
Position
complement(2874808..2878944)
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQTFLGQKRLRKYYGKIREVLEMPNLIEVQKSSYDLFLRSGDAETPTDGDGIQGVFQSV
FPIKDFNETSVLEYVKYELEKPKYDVEECQQRDMTYSAPLKVTLRLIVFDVDEDTGAKSV
KDIKEQDVFMGDMPLMTPNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYALGLDQEAIMNAYYNTVNYTLKD
GEGWVAPFFPDRVRGTRPSYDLVDAATGEILFEKGKKVTPRAVKQLIDEGKVTELLLPFG
HIAGKFAARDIINEETGAIYVEAGDELTLEHDKDGTLIGGTAKELIDAGITEIPLLDIDN
INVGPYMRNTMAADKNMNRDTALMDIYRVMRPGEPPTVEAASNLFDTLFFDADRYDLSAV
GRVKMNMRLALDKEDTQRTLDRDDIVACIKALVDLRDGRGDIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHATHYGRMCPIETPEGPNIGLINSLATFAR
VNKYGFIETPYRKVTNGVVSDDVQYMSATEEMRHTVAQANANLDENMKFVNDLVSTRKSG
DYTLSPSENVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLQAEAPLV
GTGIEEVVARDSGAAYMAKRGGIIDQVDASRIVIRATEDLELGDAGVDIYRMRKFQRSNQ
NTCINQRPLVKVGETVQKGQVIADGPSTDMGELALGKNVVVAFMPWNGYNYEDSILISER
VSRDDVFTSIHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGADVEPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVKPGDFGTVVEVRVFNRHGVEK
DERALQIEREEVERLARDRDDELGILDRNIYARLQSMIIGKTAVKGPKGVKANSEITEDL
LASLSRGQWWQLALADEDDAKIVEALNEQYEIQKRTLDARFEDKVEKVRRGDDLPPGVMK
MVKVFVAVKRKLQPGDKMAGRHGNKGVISKVVPMEDMPFLADGTPVDFCLNPLGVPSRMN
VGQILETHMGWAARGLGINIDEALQEYKRSGDLTPVREAMHHAYGDDVYEEGISGMDEET
LLDAAKNVARGVPIATPVFDGAKEADVNDSLTRAGFDSSGQSVLFDGRTGEQFARPVTVG
VKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKVYESIVKGEDNFEAGIPESFNVLVKEVRGLGLNMELLDAEEDE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaccttccttggccagaaacgtctacgtaaatactatggcaaaatccgcgaa
gtgctggagatgccgaacctgatcgaggttcaaaaatcctcttatgatttgttcctgcgc
tccggcgatgcggaaacaccgacagacggtgacggcatccaaggcgtgttccagtcggtt
ttcccgatcaaggacttcaacgagacgtcggtgcttgaatacgtcaagtacgagctcgag
aagcccaaatacgatgtcgaggaatgtcagcaacgcgacatgacctacagcgcgcctttg
aaggtgacgctgcgcctcatcgtatttgatgtggatgaggacaccggtgcgaaatcggta
aaagacatcaaagaacaagacgtgttcatgggcgacatgcccctgatgacgccaaacggt
acctttgttgtgaacggtacagagcgtgttatcgtatcccagatgcaccgttcgcccggc
gttttctttgaccacgacaaaggcaaaacccactcttcgggtaagctgctgtttgcttgc
cgcatcatcccataccgcgggtcgtggctcgacttcgaattcgacgccaaagacatcgtg
ttcgcgcgcatcgaccgtcgtcgtaagctgcctgtaacaacgctgctctacgcgcttggc
cttgaccaagaagcgatcatgaacgcgtattacaacaccgtgaactatacgctgaaagac
ggcgaaggctgggttgcacctttcttccctgaccgtgtgcggggcacacgtccatcgtat
gatctggttgacgccgcaacaggcgagatcctgttcgagaagggcaagaaggttacgcct
cgtgccgtgaagcagttgatcgacgaaggcaaagtgacagaactgctgctgcccttcggt
cacatcgcgggcaaattcgccgcgcgtgacatcatcaacgaagaaaccggcgcgatctat
gtcgaagcgggcgacgagctgacgctcgagcacgataaagacggcacgctcatcggcggt
acagcgaaagagctgatcgacgcgggcatcaccgagatcccacttctcgacatcgacaac
atcaacgtcggcccctacatgcgtaacaccatggcggcagacaagaacatgaaccgcgac
accgcgctcatggacatctaccgtgtgatgcgcccgggcgagccgcccacagtcgaagcc
gcgtcgaacctgttcgacacgctgttctttgatgccgatcgctatgacctttccgcggtt
ggccgcgtgaagatgaacatgcgtcttgcgctcgacaaagaagacacgcagcgcacgctg
gaccgtgacgacatcgtcgcctgtatcaaggcgctggttgatctgcgtgacggccgtggc
gacatcgacgacatcgaccaccttgggaaccgtcgtgtacgctccgtcggcgaactgatg
gaaaaccagtaccgcgtcggcctgctccggatggagcgcgcgatcaaggaacgtatgtcc
tcggtcgagatcgacactgtcatgccacaagacctgatcaacgcgaagccagcggctgct
gcggtacgtgaattcttcggctccagccagctgtcgcagttcatggaccaaaccaaccca
ctgtccgaggtgacgcacaagcgtcgtctctccgcgcttgggccaggtggtctgacacgc
gaacgtgccggctttgaggtgcgtgacgttcacgcgacccactacggtcgtatgtgtccg
attgaaacgcccgaaggtccgaacattggtctgattaactcgttggcaacattcgcccgc
gtcaacaaatacggctttatcgaaacaccctaccgtaaagtaacgaacggtgttgtttcc
gatgacgtgcagtacatgtccgcgaccgaagaaatgcgtcacaccgtggcgcaggcgaac
gcgaaccttgatgagaacatgaagttcgtcaacgatctggtgtcgacacggaaatccggt
gactacacgctgtcgccttccgagaatgtcgatctgatcgacgtttcgccaaaacagttg
gtctcggtcgctgcgtccttgatcccgttccttgaaaacgacgatgcgaacagggccttg
atgggctcgaacatgcaacgtcaggcggtgcctttgcttcaagccgaagcaccactggtg
gggacaggtatcgaagaagtcgtcgcacgggattccggtgctgcctatatggcgaaacgc
ggtggtatcatcgaccaagtcgacgctagccgtatcgttatccgcgccaccgaagacctt
gaactgggcgacgcgggcgtagacatctaccgcatgcgcaagttccagcgttcgaaccag
aacacctgcatcaaccagcgtccgctggtaaaagtgggcgagacggttcaaaagggtcag
gttatcgcggacggtccatcgaccgatatgggtgaactggcgcttggtaagaacgtggtc
gtcgcgttcatgccctggaacggctacaactacgaagactccatcctgatctctgaacgt
gtatcgcgtgacgacgtgtttacctcgatccacatcgaggaattcgaagtcgccgcccgt
gacacaaagctggggccagaggaaatcacacgcgatattccgaacgtcggtgaagaagcg
ctgcgcaacctcgacgaggcgggcatcgtgtacatcggtgcggatgttgaacccggtgac
attctcgtcggcaagatcactcccaagggcgaaagcccgatgacgccagaagaaaaactg
ctgcgcgccatctttggtgagaaagcctcggacgtgcgcgatacgtcgctgcgtgtgaag
cccggtgatttcggtaccgttgttgaagtccgcgtgttcaaccgtcacggcgttgaaaaa
gacgaacgtgcgctgcagatcgaacgtgaagaagtcgaacgtctggcccgtgaccgggac
gacgaacttggcattcttgaccgcaacatctacgcgcgtctgcagtcgatgatcatcggc
aagacggctgtcaaaggcccgaaaggcgtcaaggcaaactctgaaatcaccgaagacctg
ctggcatccttgtcgcgcggtcagtggtggcagttggctttggccgacgaagatgatgcc
aagatcgtcgaggccctgaacgagcagtacgagatccagaaacggaccttggatgcacgt
ttcgaggacaaagtcgaaaaagtccgtcgtggtgacgatctgcccccgggcgtgatgaag
atggtcaaggttttcgtcgcggtgaagcgcaagctgcaaccgggcgacaagatggctggt
cgtcacggcaacaaaggtgttatttccaaggttgtaccgatggaagacatgccgttcctc
gcggatggtacgccggtcgacttctgtttgaacccgctgggtgttccgtcgcgtatgaac
gtcggtcagatccttgaaacccacatgggttgggccgcacgtggcctgggcatcaacatc
gacgaggcgctgcaggaatacaaacgctccggtgatctgacacctgtgcgcgaagcaatg
caccacgcctatggcgacgatgtctacgaagaaggcatctcgggtatggacgaggaaaca
ttgctggacgcagccaagaacgtcgcgcgcggtgtcccaatcgccacgccggtattcgat
ggtgccaaagaagcggatgtgaacgacagcctgacacgggccggtttcgacagctccggt
cagtcggtcctgtttgacggccgcacgggcgagcagtttgcacgtccggtgaccgtcggc
gtcaaatacctgctgaaactgcaccaccttgtggacgataaaattcacgcgcgttcaact
ggtccatactcgctggtcacccagcagccattgggcggtaaagcgcagttcggtggtcag
cgcttcggtgagatggaggtctgggctctggaagcttacggcgctgcatacaccctgcag
gagatgctgactgtgaaatcggatgacgtggccggacggaccaaggtctatgaaagcatc
gtcaaaggcgaagacaacttcgaagccggtattccggaatcgttcaacgtacttgtgaaa
gaggtacgcggtcttggcctgaacatggaactcctggatgcggaggaagacgagtga
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integrated database retrieval system
