Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_04007
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Entry
SPAB_04007 CDS
T00628
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPAB_04007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spq03021
]
SPAB_04007
Transcription machinery [BR:
spq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPAB_04007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
TMPIT
DcrB
HTH_SUN2
YicC_N
Motif
Other DBs
NCBI-ProteinID:
ABX69336
UniProt:
A0A6C6Z754
LinkDB
All DBs
Position
3336754..3338601
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AA seq
615 aa
AA seq
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MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENTTSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEEMAPTA
THVGSELSQEDLDDDEDEDEEDGDDDAADDDNSIDPELAREKFAELRAQYVVTRDTIKAK
GRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMP
KKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVAEEVQRCLQKLRQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtcacccgtggtaaggagcaaggc
tatctgacctatgctgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
attgaagatatcatccaaatgatcaacgacatgggtattcaggtaatggaagaagcgcct
gatgccgatgatctgctgctggctgaaaataccaccagcaccgatgaagatgcggaagaa
gctgctgcacaagttctgtccagtgttgagtctgaaatcggtcgtacgactgacccggta
cgcatgtatatgcgtgaaatgggcactgttgaactgttgacccgggaaggcgaaatcgac
atcgctaaacgtatcgaagacgggatcaaccaggttcaatgctccgttgccgaatacccg
gaagccattacctatctgctggaacagtacgatcgcgttgaggctgaagaggctcgtttg
tccgatcttatcaccggctttgtcgatccgaacgcggaagaagagatggcgccgaccgca
actcacgtcggttctgaactctcccaggaagacctggatgatgacgaagacgaagatgaa
gaagacggcgacgatgacgccgccgatgacgacaacagcattgaccctgaactggcacgc
gaaaaattcgctgagctgcgcgcgcaatacgtcgttacgcgcgacaccatcaaagcgaaa
ggccgcagccatgctgccgcgcaggaagagattctgaagctgtctgaagtgttcaaacag
ttccgtctggtaccgaagcaattcgactatctggtcaacagtatgcgcgtgatgatggat
cgcgtgcgtactcaggaacgtctgatcatgaagctctgcgtcgagcagtgcaaaatgccg
aagaagaactttatcacgctgtttaccggtaacgaaaccagcgaaacctggttcaatgcc
gctatcgcgatgaacaaaccgtggtcggaaaaactgcacgatgtcgcggaagaagtgcaa
cgctgcctgcaaaaactgcggcagattgaagaagagaccggtctgaccatcgaacaggtg
aaagacatcaaccgtcgcatgtccatcggggaagcgaaagcccgccgtgcgaagaaagag
atggttgaagcgaacttgcgtctggttatttctatcgccaagaaatacaccaaccgtggc
ttgcagttccttgacctgattcaggaaggcaacatcggcctgatgaaagcggtagataag
ttcgaataccgtcgcggctacaagttctccacctacgctacctggtggattcgtcaggcg
atcacccgttctatcgccgatcaggcgcgcaccatccgtattccggtgcatatgattgag
accatcaacaagctcaaccgtatttctcgccagatgctgcaagagatgggccgcgagcca
acgccggaagagctggctgaacggatgctgatgccggaagataaaattcgtaaggtgctg
aagattgccaaagagccaatctccatggaaacgccgatcggcgacgatgaagattcgcat
ctgggtgatttcatcgaggataccaccctcgagctgccgctggactctgccactaccgag
agcctgcgcgccgccactcacgatgttttggctggcctgaccgctcgtgaagcgaaagtg
ctgcgtatgcgtttcggtatcgatatgaacaccgaccacacgctggaagaagtgggtaaa
cagttcgacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactg
cgccacccgagccgttctgaagtgctgcgcagcttcctcgacgattaa
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