Streptomyces prasinus: CP972_14680
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Entry
CP972_14680 CDS
T07676
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
spra
Streptomyces prasinus
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spra03021
]
CP972_14680
Transcription machinery [BR:
spra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP972_14680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
MarR_2
HTH_23
HTH_Crp_2
HTH_24
HTH_10
Sigma70_ECF
DUF8073_C
HTH_3
MarR
DUF7343
Apolipoprotein
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QEV10272
UniProt:
A0ABX6B953
LinkDB
All DBs
Position
3231957..3232874
Genome browser
AA seq
305 aa
AA seq
DB search
MSPRLDASPTQKATSTLPPEHLTPIGQDDTDVAPDDDLLAGLPEIPPFDEVGPVDARALS
RTLFERLESLEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKA
IDRFELSRGVEFPTFAMPTIIGEVKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLD
RSPTVGELAERLGISKDEVVEGMAASNAYTASSLDAQPEEDDSEGALSDRIGYEDHGLEG
IEYVESLKPLIAELPPRDRKILSLRFVACMTQSEIGEELGISQMHVSRLLSRTLVRLRKG
LTLEE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcatcgcctacccagaaagcgacgtcgacactccccccggaa
catctgactcccatcgggcaggacgacacggacgtcgccccggacgacgacctactcgcc
gggctcccggagatccccccttttgacgaggtgggcccggtcgacgcccgggcgctgtcc
aggaccctcttcgagcggctggagtcgctggaggaaggcacccacgagtacgcgtacgta
cgcaacacgctcgtcgaactgaacctggccctggtcaagttcgccgcctcccgcttccgc
tcgcgcagcgagccgatggaggacatcatccaggtcggcaccatcggtctgatcaaggcg
atcgaccgcttcgagctttcgcgcggtgtggagttccccaccttcgcgatgccgaccatc
atcggcgaggtcaagcgcttcttccgggacacctcctggtccgtgcgcgtaccgcgccga
ctgcaggaactgcggctcgacctggccaaggccggcgacgaactggcgcagcagctcgac
cggtccccgacggtgggcgaactggccgagcgcctgggcatctccaaggacgaggtcgtc
gagggcatggcggcgtcgaacgcctacaccgcctcctcgctcgacgcccagccggaggag
gacgactccgagggcgcgctgtcggaccggatcggttacgaggaccacggactcgaaggc
atcgagtacgtcgagtcgttgaagccgctgatcgccgaactgccgccgcgcgaccggaag
atcctctcgctgcgcttcgtggcctgcatgacccagtccgagatcggtgaggaactgggc
atctcgcagatgcacgtgtcacggctgctgtcgcgcaccctggtacggctgcgcaagggt
ctgaccctcgaggaatga
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