Streptomyces prasinus: CP972_27195
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Entry
CP972_27195 CDS
T07676
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spra
Streptomyces prasinus
Pathway
spra00040
Pentose and glucuronate interconversions
spra01100
Metabolic pathways
spra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CP972_27195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CP972_27195
Enzymes [BR:
spra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CP972_27195
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QEV08820
UniProt:
A0ABX6B408
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Position
6046026..6047570
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AA seq
514 aa
AA seq
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MKKSAAVRLGATLATAALAAATGLAVSTSSASAAVTGSATGYATQNGGTTGGAGGQTVRA
TTGTAIHTALCNRASSSTPIIIEVQGTINHGNTTKVSGSSCNTAAGVIELKQISNVTIVG
VGSGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESGVRNVWVDHATL
EASGGESEGYDGLFDMKDNTQYVTLSYSILRNSGRGGLIGSSESDRSNGYVTFHHNKYEN
IDSRTPLLRGGIAHIYNNHYVDLHESGINSRAGARAKVDNNYFEDSKDVLGTFYTSEAGY
WQVGGNVFDNVTWSARSGDNQPAGPNPTSNTSVSIPYSYSLDNANCVPDVVNRTAGANKG
NQVSNGNCTPQNPGPTDPTDPTDPPTDPTDPPTGTNLSLGAGADGSSKASGTSYGNVIDG
NTGSYWSPSGSTGSVSVKWSSATSVSKAHIREASGSAGAIRSWRLLDHDTGAVLASGSTA
GAVSFPRTSLKKITFEITGSNGTPRVAEFETYGG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcagcagcagtgcgcctcggcgccacgctggccaccgcggccctcgcggcc
gcgaccgggctggcggtgtcgacgtcctcggcgtcggcggccgtgaccggcagtgccacc
ggctacgccacccagaacggcgggaccaccggcggcgccggcggacagaccgtgcgcgcc
accacgggcaccgcgatccacacggccctgtgcaaccgggccagcagcagcaccccgatc
atcatcgaggtccaggggaccatcaaccacggcaacaccaccaaggtgtccggcagcagc
tgcaacaccgcggccggcgtgatcgagctcaagcagatcagcaacgtcacgatcgtcggg
gtcggcagtggtgccgtcttcgaccaactgggcatccacatccgggagtccagcaacatc
atcatccagaacgtgaccgtccggaacgtcaagaagtccggctcgcccacctccaacggc
ggcgacgccatcggcatggagagcggcgtccgcaacgtctgggtggaccacgccacgctc
gaggcgtccggcggggagtcggagggctacgacggcctcttcgacatgaaggacaacacc
cagtacgtgaccctgtcgtacagcatcctgcgcaactccggccgcggcggcctcatcggc
tccagcgagagcgaccgctccaacggctacgtcaccttccaccacaacaagtacgagaac
atcgactcccgcaccccgctgctgcgcggcggcatcgcgcacatctacaacaaccactac
gtcgacctgcacgagtccggcatcaactcccgggccggggcgcgcgcgaaggtcgacaac
aactacttcgaggactccaaggacgtcctcggcaccttctacaccagcgaggccggctac
tggcaggtcggcggcaacgtcttcgacaacgtgacctggtccgcccgcagcggcgacaac
cagcccgccggtcccaacccgacgtccaacacctcggtgagcatcccctactcctacagc
ctcgacaacgcgaactgcgtaccggacgtggtgaaccggacggccggcgccaacaagggc
aaccaggtctcgaacggcaactgcaccccgcagaacccgggcccgaccgaccccaccgac
cccactgatccccccaccgacccgaccgatccccccaccgggaccaacctcagcctcggc
gccggcgccgacggctccagcaaggccagtgggacgagctacggcaacgtgatcgacggc
aacaccggcagctactggtcgccgagcggctcgaccggctccgtctcggtcaagtggtcc
tccgccacctcggtgtcgaaggcccacatccgggaggcgagcggttccgcgggggccatc
cgcagctggaggctcctcgaccacgacaccggagccgtgctggcctccggcagcacggcg
ggcgccgtctccttcccgcggacctcgctgaagaagatcaccttcgagatcaccggctcg
aacggcaccccgagggtggccgagttcgagacctacggcggctga
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