Streptomyces pristinaespiralis: SPRI_3908
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Entry
SPRI_3908 CDS
T04073
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
spri
Streptomyces pristinaespiralis
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spri03021
]
SPRI_3908
Transcription machinery [BR:
spri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPRI_3908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_Crp_2
GerE
NirdL-like_HTH
HTH_24
MarR
HTH_3
DUF134
DUF7343
HTH_11
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ALC22214
UniProt:
A0A0M4DCZ2
LinkDB
All DBs
Position
complement(4552223..4553065)
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AA seq
280 aa
AA seq
DB search
MSASTAPQVPPQNERPDDTAPAARPQRRGADTRALTQVLFGRLKGLQAGTAEHSRVRAAL
IEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEI
KRYFRDNVRTVHVPRRLHELWVQVNGATEDLTTAHGRSPTTAEIAERLKIGEDEVLACIE
AGRSYHATSLEAAQEGDGMPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILMLR
YYSNLTQSQISQELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagtactgcgcctcaggtgccacctcagaacgagaggccggacgacaccgcc
cctgccgcgagaccgcagaggcgcggcgcggacacccgggccctgacccaggtgctgttc
ggccgcctcaaaggactccaggcggggaccgcggagcactccagggtgcgcgccgcactc
atcgaggccaatctccccctcgtgcggtacgccgccgcccgcttccgcagtcgcaacgag
ccgatggaggacgtcgtccaggtcggcaccatcgggctgatcaacgccatcgaccggttc
gacccggaccgcggcgtgcagttcccgaccttcgcgatgcccacggtggtgggcgagatc
aagcggtacttccgcgacaacgtgcggacggtccacgtgccacggcgtcttcacgagctg
tgggtgcaggtgaacggggccaccgaggacctgacgaccgcccacggccggtcgcccacg
accgccgagatcgccgagcggctgaagatcggcgaggacgaggtactggcctgcatcgag
gccggacgctcgtaccacgcgacgtcgctggaggccgcccaggagggcgacggcatgccc
gggctgctggaccggctcggctacgaggacccggcgctggccggcgtcgaacaccgcgat
ctggtccgccatctcctcgtccagctgccggagcgggaacagcggatcctgatgctccgc
tactacagcaacctgacacagtcgcagatcagtcaggagctcggcgtctcccagatgcat
gtgtcgcgactgctggcgagaagtttcgctcgacttcgttccgcaaacaggatcgaagcg
tag
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