Streptomyces pristinaespiralis: SPRI_5566
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Entry
SPRI_5566 CDS
T04073
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
spri
Streptomyces pristinaespiralis
Pathway
spri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPRI_5566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spri03400
]
SPRI_5566
DNA repair and recombination proteins [BR:
spri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPRI_5566
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPRI_5566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
UB2H
AAA_5
AAA_16
UvrD-helicase
DUF87
Helicase_RecD
HAMP
AAA_7
HEM4
nSTAND3
AIG1
Motif
Other DBs
NCBI-ProteinID:
ALC23872
UniProt:
A0A0M4DJS9
LinkDB
All DBs
Position
6482830..6484944
Genome browser
AA seq
704 aa
AA seq
DB search
MRPVSKIERTVAPFEVVSHFQPSGDQPTAIAELERRIRAGEKDVVLLGATGTGKSATTAW
MIEKLQRPTLVMAPNKTLAAQLANEFRELLPNNAVEYFVSYYDYYQPEAYVPQSDTYIEK
DSSINEEVERLRHSATNSLLTRRDVVVVASVSCIYGLGTPQEYVDRMVQLKVGDEIDRDQ
LLRRFVDIQYTRNDLAFQRGTFRVRGDTIEIFPVYEELAVRIEMFGDEIEALSTLHPLTG
EILSEDQSLYVFPASHYVAGPERMEKAVNGIEAELEQRLAELDKQGKLLESQRLRMRTTY
DIEMMRQIGSCSGIENYSMHFDDREPGSPPNTLLDYFPEDFLLVIDESHVTVPQIGAMYE
GDASRKRTLVDHGFRLPSALDNRPLKWEEFKERIGQTVYLSATPGTYELSRGDGFVEQII
RPTGLIDPQVVVKPTEGQIDDLVHEIRERTEKDERVLVTTLTKKMAEDLTDYFLELGIQV
RYLHSDVDTLRRVELLRELRSGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGT
SLIQTIGRAARNVSGQVHMYADKITPAMEKAIEETNRRREKQIAYNTENGIDPQPLRKKI
NDIVATIAREEIDTEELLGTGYRQAKAEKPGKGAKAPVPSLGAGRKGEILSDRPAAELAG
IIEEMTDRMRAAAAELQFEVAARLRDEVGELKKELRQMKEAGLA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccgtttccaagatcgaacgtacggtggcgcctttcgaggtcgtcagccacttc
cagcccagcggtgaccagccgacggccatcgccgagctggagcgacgcatccgtgccggt
gagaaggacgtcgtcctgctcggagcgacgggcacgggcaagtcggcgaccacggcctgg
atgatcgagaagctccagcgccccaccctggtcatggcgcccaacaagaccctggccgcc
cagctggcgaacgagttccgcgagctcctgccgaacaacgcggtggagtacttcgtctcg
tactacgactactaccagcccgaggcgtacgtcccgcagtcggacacctacatcgagaag
gactcctcgatcaacgaggaggtcgagcggctgcggcactccgcgaccaattccctcctc
acccggcgcgacgtcgtcgtggtcgcctccgtctcctgcatctacggcctcggcaccccg
caggagtacgtggaccggatggtgcagctcaaggtcggcgacgagatcgaccgcgaccag
ctgctgcgccgcttcgtcgacatccagtacacccgcaacgacctggccttccagcgcggc
accttccgtgtgcgcggcgacaccatcgagatcttcccggtctacgaggagctcgccgtc
cgcatcgagatgttcggcgacgagatcgaggcgctgtccacgctgcaccccctcaccggc
gagatcctcagtgaggaccagtcgctgtacgtgttccccgccagccactacgtggcgggc
cccgagcggatggagaaggcggtcaacggcatcgaggccgagctggagcagcgcctcgcc
gagctcgacaagcagggcaagctgctggagtcccagcggctgcgcatgcggaccacgtac
gacatcgagatgatgcgccagatcggctcctgctccggcatcgagaactactcgatgcac
ttcgacgaccgcgagcccgggtccccgccgaacaccctcctcgactacttccccgaggac
ttcctgctcgtcatcgacgagtcgcacgtcacggttccgcagatcggcgcgatgtacgag
ggcgacgcgtcccgcaagcgcacactcgtcgaccacggcttccggctgccgtccgccctc
gacaaccgcccgctgaagtgggaggagttcaaggagcgcatcggccagaccgtctatctc
tcggcgacaccgggcacctacgaactgtcccgcggcgacggcttcgtggagcagatcatc
cgccccaccgggctcatcgacccacaggtcgtcgtcaagccgaccgagggccagatcgac
gacctggtgcacgagatccgcgagcgcacggagaaggacgagcgggtcctggtgaccacg
ctcaccaagaagatggccgaggacctcaccgactacttcctcgagctcggcatccaggtc
cgctatctgcacagcgacgtggacacgctgcgccgtgtcgagctgctgcgggagctgcgc
tccggcgagtacgacgtcctggtcggcatcaacctgctccgtgagggtctcgacctgccg
gaggtgtcgctggtcgcgatcctcgacgccgacaaggagggcttcctgcgctccggcacc
tccctgatccagaccatcggccgcgcggcgcgcaacgtctccggccaggtccatatgtac
gcggacaagatcacgccggcgatggagaaggccatcgaggagaccaaccgccgccgcgag
aagcagatcgcgtacaacacggagaacggcatcgacccccagccgctccgcaagaagatc
aacgacatcgtcgcgaccatcgcgcgcgaggagatcgacaccgaggaactgctgggcacc
ggctaccgccaggcgaaggcggagaagcccggcaagggtgccaaggcgcccgtcccctcg
ctcggcgccggccgcaagggcgagatcctcagcgaccgccccgcggccgaactcgccggg
atcatcgaggagatgacggaccggatgcgcgcggccgccgcggagctccagttcgaggtg
gccgcccgactgcgcgacgaggtgggcgagttgaagaaggagctccgccagatgaaggag
gcagggctcgcctga
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