Spiroplasma sp. NBRC 100390: S100390_v1c03100
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Entry
S100390_v1c03100 CDS
T05859
Symbol
pepV
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn01100
Metabolic pathways
sprn01120
Microbial metabolism in diverse environments
sprn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
S100390_v1c03100 (pepV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sprn01002
]
S100390_v1c03100 (pepV)
Enzymes [BR:
sprn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
S100390_v1c03100 (pepV)
Peptidases and inhibitors [BR:
sprn01002
]
Metallo peptidases
Family M20
S100390_v1c03100 (pepV)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
YBR085C_A_C
Motif
Other DBs
NCBI-ProteinID:
APE13123
LinkDB
All DBs
Position
335463..336806
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AA seq
447 aa
AA seq
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MEIDVIKLQEKYFSEALAKIQDIIQIPSVRSAAQPSAPFGIGTKAVLDYAIKLAQELGFK
TYQDPENRYGYVEYGTGAEIFAILGHLDVVPAGDLKKWDFDPFQAQIKDGKLLGRGSFDD
KGPTIINLYALKYLKDHNYQPDYCIRLIFGLTEETDWASIEAYMAIEGTPALGYTPDGEF
PVVYAEKGIINADIIGKGEKFVLLGGEAYNCVTDVVRYQGPYLTEIKAKLDQNQIETALE
NDWLIVKGKASHGSLPERGINAALATLATYAELTTDSPIANFVKKHLYNDFNFSQIFSTM
KDETGLLVVNNGIVEINAEKTRLTLNMRVPISYQLKDVEEPLTGELSNYHLQLTIISWEK
PIHVPIDSPMIKNIMRVYRDVTGDQDAKPVAIGGGTYAKAMPNCVAFGAEFDINESTMHA
YNEYVKISDLQKMLEIYTKAIPLLTTK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagatgttattaaattacaagaaaaatatttttcagaagcattagcaaaaatt
caagatattattcaaattccatcggtacgtagtgcagcacaaccaagtgctccatttgga
ataggaacaaaagctgttttagattatgccattaaattagcacaagaattaggttttaaa
acttatcaggatcccgaaaaccgttatggttatgttgaatatggtacgggtgcagaaatc
tttgctattttaggacatttagatgtagttccggctggtgatcttaaaaaatgagatttt
gacccatttcaagcgcagattaaagatggaaaattattaggtcgtggctcatttgatgat
aaaggaccaaccattatcaatttatatgctttaaaatatttaaaagaccataattaccaa
ccagattattgtattcgtttaattttcggtttaacagaagaaactgattgagcgtcaatt
gaagcatatatggcaattgaaggaacccctgcgctaggttatactccagatggtgaattt
ccagttgtatatgcagaaaaaggaattattaatgccgatattattggtaaaggggaaaaa
tttgttttattaggtggtgaggcatataattgtgtgactgatgttgttcgttatcaagga
ccatatcttacagaaattaaagctaaattagatcaaaaccaaattgaaacagctcttgaa
aatgattgattaattgtgaaggggaaagcatcacacggaagtttacctgaacgaggaatt
aatgcagcattagcaacattggcaacatatgctgagttaacaactgattcaccaattgct
aattttgtaaaaaaacatttatacaatgattttaattttagtcagattttttcaacaatg
aaggatgaaactggtttattggttgttaacaatggaattgttgagattaatgctgaaaaa
acgcgtttaacattaaatatgcgagtaccaatttcatatcagttaaaagatgttgaagag
ccattaacaggtgagttatcaaattatcatttacaattaacaattatttcttgagaaaaa
ccaattcatgtgccaattgatagtccgatgattaagaatattatgcgggtttatcgtgac
gttactggtgatcaggatgcaaaaccagttgcaattggtggaggaacttatgcaaaggca
atgccaaattgtgttgcttttggtgctgaatttgatattaatgaatcaacaatgcatgca
tataatgagtatgttaaaattagtgatttacaaaaaatgttagaaatttatacaaaggca
attccattgttgacaacaaaataa
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