Sphingomonas sp. R1: OIM94_14500
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Entry
OIM94_14500 CDS
T11062
Symbol
pgeF
Name
(GenBank) peptidoglycan editing factor PgeF
KO
K05810
purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:
2.4.2.1
2.4.2.28
3.5.4.4
]
Organism
sprr Sphingomonas sp. R1
Pathway
sprr00230
Purine metabolism
sprr00270
Cysteine and methionine metabolism
sprr01100
Metabolic pathways
sprr01232
Nucleotide metabolism
Module
sprr_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
OIM94_14500 (pgeF)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
OIM94_14500 (pgeF)
Enzymes [BR:
sprr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.1 purine-nucleoside phosphorylase
OIM94_14500 (pgeF)
2.4.2.28 S-methyl-5'-thioadenosine phosphorylase
OIM94_14500 (pgeF)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.4 adenosine deaminase
OIM94_14500 (pgeF)
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Motif
Pfam:
Cu-oxidase_4
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
UYY76705
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Position
complement(3022278..3023045)
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AA seq
255 aa
AA seq
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MSGVDPVRARALAGVPHGFLGRAGGVSTGMVAGLNVGTGSNDDPGAIAQNRRLAVQAVLP
GARLVTVYQVHSADAVTVVAPFDEDLRPRADALVTNRPGLVLGILTADCAPVLFADREAG
VVGAAHAGWKGAIGGVTDSTISAMEALGARREHIAAAVGPCIARASYEVDAAFFQRFCTQ
DAANERFFADGRPEHFQFDLEAYVVHRLALAGLRTIEALGLDTYPNEDRFFSFRRATHRL
EPDYGRQISLIGLPG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggggtcgatcccgttcgcgcccgcgcgcttgccggcgtgccgcatggctttctc
ggccgcgccggaggcgtgtcgaccgggatggtcgccgggctgaacgtcggcaccggctcg
aacgacgatccgggtgcgatcgcgcagaaccggcggctcgcggtgcaggccgtgctgccc
ggcgcgcggctggtcaccgtctatcaggtgcattccgcggacgcggtgacggtagtcgca
ccgtttgacgaagatctgcgcccccgcgccgatgcgctggtcacgaaccgtccggggctg
gtgctcggcatccttaccgctgattgcgcgcccgtgctgttcgccgatcgcgaagcgggt
gtggtcggggcggcacatgccggatggaagggcgcgatcggcggcgtgaccgactccacc
atttccgcgatggaggcgctgggcgcccgccgcgagcatatcgccgccgcggtcggcccc
tgcatcgcacgtgccagctacgaggtggatgccgcctttttccagcgcttctgcacgcag
gatgcagccaacgaacgcttctttgcggatggccggcccgagcatttccagttcgacctg
gaggcttatgtcgtccatcggctcgcgctggccggcctgcgcacgatcgaggcgctgggc
ctcgacacctacccgaacgaggaccggttcttcagcttccgtcgcgcgacccaccggctg
gaacccgattatggccgacagatcagcctgatcgggctgccggggtaa
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