Sphingobacterium sp. R2: VXM68_04260
Help
Entry
VXM68_04260 CDS
T10631
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VXM68_04260 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_04260 (ung)
Enzymes [BR:
sprz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VXM68_04260 (ung)
DNA repair and recombination proteins [BR:
sprz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VXM68_04260 (ung)
Prokaryotic type
VXM68_04260 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XCY06172
LinkDB
All DBs
Position
complement(1038291..1038965)
Genome browser
AA seq
224 aa
AA seq
DB search
MEKQYDDSWAPVLKPLFAQPYMKQLSTFVQGERRQKKVFPPAGLVMNAFKLTPLDEVKVV
ILGQDPYHNDGQAHGLSFSVPEGIAVPPSLKNIFKELQDDIPGFVEPQSGNLTSWAKQGV
LLLNATLTVEAHRAASHQKKGWEIFTDSIIHAISEHCDHVVFLLWGSYAQKKNVLIDAKK
HLILTTVHPSPLSVYRGFFGSKHFSKANEYLVAQGKTAIDWRLV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaatatgatgattcttgggcgcctgtgttaaagccgttgttcgcccaacct
tatatgaaacagttgtctacttttgtacaaggggagcgtcgacaaaagaaagtgtttcca
ccggcaggtcttgtgatgaatgcttttaaactgaccccactggatgaagtgaaagttgtc
attttaggacaagatccttaccataatgacggacaggcgcatggactatctttttctgtt
ccggaaggaattgcggtgccgccgtccttaaaaaatattttcaaggaattgcaagatgac
atccctggttttgttgagccacaatctggcaatttgacttcttgggccaaacaaggagtg
ctgctattgaatgcgacgttgaccgtagaagcacatcgcgcagcatcccatcaaaagaaa
ggttgggagatttttacagacagcattattcacgccatttcggagcattgtgatcacgtc
gtatttctattatggggaagttatgcccaaaagaaaaatgtgcttattgatgcgaaaaaa
caccttatcctaacgacggtacacccctcacccttatctgtttatcgcggtttttttggt
agcaagcacttttcgaaagcaaacgaatacttggttgcgcagggtaaaactgcaattgat
tggcgactggtttaa
DBGET
integrated database retrieval system
