Sphingobacterium psychroaquaticum: E2P86_10265
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Entry
E2P86_10265 CDS
T05967
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc02020
Two-component system
spsc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E2P86_10265 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E2P86_10265 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsc03021
]
E2P86_10265 (rpoN)
Transcription machinery [BR:
spsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2P86_10265 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Tma16
DUF4158
MarR
Motif
Other DBs
NCBI-ProteinID:
QBQ41516
UniProt:
A0A1X7IIP2
LinkDB
All DBs
Position
2425276..2426739
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AA seq
487 aa
AA seq
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MLKQTLQQKLLQKLSPQQIQFIKLLQVPTVSLDARIKEELEENPALEDGSLANMNDPVEE
YPDRDPDEQFNEESGEFDDEFTVDEYIQEDDYNDYSSNYGNDDDEDKKEMPIAVQDSFFE
SLQNQLDLLALSDRDYQIGQQIIGSLDDDGYLRRSTLSLIDDLAFSQNVDVNENEVEAVL
KVIQDFEPSGIGARDLQECLLIQLHRKDTANPIIKQAIRIVENYLEEFTKKHYDKIEKQL
GIDSAELKDIINEILKLNPKPGDSGASAGKQLHIIPDFHITNNDGVLHLTLNSRNAPELR
VSRSYQEMFEHYEKAEKNDKKMKEAVQFVKQKLDSAKWFIDAIKQRQQTLLKTMNAIMEY
QYEYFLTGDERLLKPMILKDIADRIEMDISTVSRVANSKYVQTEFGTFLLKSFFSEAIQT
DSGEEVSNKEVKKILEECIANEDKRKPLADEKLTEILKEKGYSIARRTVAKYREAMNIPV
ARLRKEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacagactttacaacaaaagctattacaaaagctttcgccacagcaaatacag
tttatcaaactcttacaggtacccacggtgtctttggacgcccgtattaaagaagagctt
gaagaaaaccctgcgctcgaagatggaagccttgccaacatgaacgatcccgtggaggag
taccccgaccgagatccggatgagcaattcaatgaggagtctggtgaatttgatgatgag
tttacagtcgacgaatatatccaagaggatgattacaacgattactccagcaattacgga
aatgatgacgacgaagataaaaaggaaatgcccatcgctgtgcaggattctttcttcgaa
tcgctacagaatcaactggacctcttagccttatcggatcgcgactaccagatcggacaa
cagattatcggtagcttggacgacgatggttacttgcgccggtctaccctctctttgatt
gatgacttagccttttcgcaaaatgtcgacgtcaatgaaaatgaagtggaagccgtcctg
aaagttatacaagactttgaaccatcaggaattggagctcgcgacctacaggaatgccta
ctgatccaattacatcgaaaagataccgcaaatccgatcattaaacaggctatacgcatt
gtagaaaactacctcgaagagtttactaaaaagcattacgataaaattgagaagcagctg
ggtatagattccgcagagctaaaggatattatcaatgaaatcttaaaattaaaccctaag
ccgggagactctggtgcttctgcaggtaagcagctgcatatcattccagattttcatatc
acgaataatgacggtgtcttacacttaaccctaaatagccgcaatgcgcccgagctgcgt
gtatcacgttcttaccaggagatgtttgaacattatgagaaagcagagaagaacgataaa
aagatgaaagaagcggttcagtttgtcaaacaaaaactggattcagcaaaatggtttatc
gatgcgattaagcaacgccagcaaacgcttttaaagacgatgaatgccattatggaatac
caatatgagtatttcttgaccggcgacgaaagacttcttaaaccgatgatcctaaaggat
atagccgaccgtatcgaaatggatatttcaacggtatcccgggtagcgaactctaaatat
gtacagaccgagtttggaaccttcttactgaagtcattcttctctgaagctatccaaacc
gactccggcgaagaagtttcaaacaaagaggtgaaaaaaatcctagaggaatgtatcgct
aatgaagataagcgtaaaccgctggcggatgaaaaattgaccgaaatcttaaaagaaaaa
ggatacagtattgcgcgccgaacggtagcgaaatatcgggaagcgatgaacatccctgta
gctcgcctacgtaaagaactgtag
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