KEGG   Sphingobacterium psychroaquaticum: E2P86_10265
Entry
E2P86_10265       CDS       T05967                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
spsc  Sphingobacterium psychroaquaticum
Pathway
spsc02020  Two-component system
spsc02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:spsc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    E2P86_10265 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    E2P86_10265 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spsc03021]
    E2P86_10265 (rpoN)
Transcription machinery [BR:spsc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     E2P86_10265 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID Tma16 DUF4158 MarR
Other DBs
NCBI-ProteinID: QBQ41516
UniProt: A0A1X7IIP2
LinkDB
Position
2425276..2426739
AA seq 487 aa
MLKQTLQQKLLQKLSPQQIQFIKLLQVPTVSLDARIKEELEENPALEDGSLANMNDPVEE
YPDRDPDEQFNEESGEFDDEFTVDEYIQEDDYNDYSSNYGNDDDEDKKEMPIAVQDSFFE
SLQNQLDLLALSDRDYQIGQQIIGSLDDDGYLRRSTLSLIDDLAFSQNVDVNENEVEAVL
KVIQDFEPSGIGARDLQECLLIQLHRKDTANPIIKQAIRIVENYLEEFTKKHYDKIEKQL
GIDSAELKDIINEILKLNPKPGDSGASAGKQLHIIPDFHITNNDGVLHLTLNSRNAPELR
VSRSYQEMFEHYEKAEKNDKKMKEAVQFVKQKLDSAKWFIDAIKQRQQTLLKTMNAIMEY
QYEYFLTGDERLLKPMILKDIADRIEMDISTVSRVANSKYVQTEFGTFLLKSFFSEAIQT
DSGEEVSNKEVKKILEECIANEDKRKPLADEKLTEILKEKGYSIARRTVAKYREAMNIPV
ARLRKEL
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgttaaaacagactttacaacaaaagctattacaaaagctttcgccacagcaaatacag
tttatcaaactcttacaggtacccacggtgtctttggacgcccgtattaaagaagagctt
gaagaaaaccctgcgctcgaagatggaagccttgccaacatgaacgatcccgtggaggag
taccccgaccgagatccggatgagcaattcaatgaggagtctggtgaatttgatgatgag
tttacagtcgacgaatatatccaagaggatgattacaacgattactccagcaattacgga
aatgatgacgacgaagataaaaaggaaatgcccatcgctgtgcaggattctttcttcgaa
tcgctacagaatcaactggacctcttagccttatcggatcgcgactaccagatcggacaa
cagattatcggtagcttggacgacgatggttacttgcgccggtctaccctctctttgatt
gatgacttagccttttcgcaaaatgtcgacgtcaatgaaaatgaagtggaagccgtcctg
aaagttatacaagactttgaaccatcaggaattggagctcgcgacctacaggaatgccta
ctgatccaattacatcgaaaagataccgcaaatccgatcattaaacaggctatacgcatt
gtagaaaactacctcgaagagtttactaaaaagcattacgataaaattgagaagcagctg
ggtatagattccgcagagctaaaggatattatcaatgaaatcttaaaattaaaccctaag
ccgggagactctggtgcttctgcaggtaagcagctgcatatcattccagattttcatatc
acgaataatgacggtgtcttacacttaaccctaaatagccgcaatgcgcccgagctgcgt
gtatcacgttcttaccaggagatgtttgaacattatgagaaagcagagaagaacgataaa
aagatgaaagaagcggttcagtttgtcaaacaaaaactggattcagcaaaatggtttatc
gatgcgattaagcaacgccagcaaacgcttttaaagacgatgaatgccattatggaatac
caatatgagtatttcttgaccggcgacgaaagacttcttaaaccgatgatcctaaaggat
atagccgaccgtatcgaaatggatatttcaacggtatcccgggtagcgaactctaaatat
gtacagaccgagtttggaaccttcttactgaagtcattcttctctgaagctatccaaacc
gactccggcgaagaagtttcaaacaaagaggtgaaaaaaatcctagaggaatgtatcgct
aatgaagataagcgtaaaccgctggcggatgaaaaattgaccgaaatcttaaaagaaaaa
ggatacagtattgcgcgccgaacggtagcgaaatatcgggaagcgatgaacatccctgta
gctcgcctacgtaaagaactgtag

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