Shewanella psychrophila: Sps_00030
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Entry
Sps_00030 CDS
T05063
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
spsw
Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsw03016
]
Sps_00030
Transfer RNA biogenesis [BR:
spsw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Sps_00030
Prokaryotic type
Methyltransferases
Sps_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Ras
ABC_tran
Dynamin_N
AAA_28
Roc
Gtr1_RagA
AGP
Arf
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AQS35255
UniProt:
A0A1S6HIB6
LinkDB
All DBs
Position
complement(32459..33820)
Genome browser
AA seq
453 aa
AA seq
DB search
MTADTIVAQATAPGRGGVGIIRISGDQASEVAMAMLGHIPKTRYADYCDFKTADGEVIDQ
GIALYFQGPNSFTGEDVLELQGHGGQIVLDMLIKRVMETKGIRIARPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALNSLQGEFSTEVHALVEQVTNLRLYVEAAIDFPDEEV
DFLSDGKIAGSLNKIITRLDSVKASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTSDTVEQIGIERAWAEIETADQVLF
MVDGTTTNAVDPHEIWPDFIDRLPKKLGITVVRNKADITGESLELTEDHGHPVFRISAKT
GLGVDSVKQHLKSLMGYQSNLEGGFIARRRHLEALDLASSHLMLGKEQLEVYLAGELLAE
ELRMTQMALSEITGKFTSDDLLGKIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagatactatcgtggcacaagcaaccgctccagggcgtggtggtgtaggtatc
attcgtatctccggcgatcaggccagcgaagtagctatggccatgcttggacacattccc
aagacacgatatgccgactactgtgattttaagactgccgatggtgaagtgatcgatcaa
ggtatcgccctctatttccagggccctaactcctttaccggtgaagatgtactggaacta
caaggtcatggcggccaaatcgtgctcgatatgctgatcaagcgtgtaatggaaaccaaa
ggcattcgcatcgccagacccggtgagtttagcgaacaggccttcatgaatgacaaatta
gatctcacccaggccgaagccatcgccgatcttatcgatgccaccagcgaacaagctgct
aagagcgcactgaactcgctccaaggcgaattttcgacagaagtacatgcattagtcgaa
caggtcactaacttgcgcctatacgtcgaggcagccatagactttcccgatgaagaagta
gacttcctctcagacggaaagattgccggttcactcaacaagatcatcaccagactggat
tcggttaaggccagcgccaagcaaggttcgataatccgtgaaggtatgaaggtagtgatt
gcaggtcgacccaatgcggggaaatctagccttcttaacgcacttgcgggtaaagagtct
gccatcgtcaccgaaatagcaggcacgacccgtgacgtactacgtgaacatatccatctc
gatggcatgccactgcatattatcgacacagctggattacgtgacacctcggataccgtc
gaacagatagggatcgaacgagcctgggccgaaatagaaaccgccgatcaggtgctgttt
atggtcgatggcaccacaacaaatgcagtagatccgcacgaaatatggcctgactttatc
gatcgcttacctaagaaactaggtattacagtggtacgtaacaaggcagacatcacaggc
gaatcactagaactcaccgaagatcacggccatccagtatttcgcatctcagctaagaca
ggtttaggtgtcgattccgtcaaacaacacctgaaatcccttatgggttatcagagtaat
ctcgaaggcggctttatcgcacgtcgtcgtcatttagaggcacttgatctagccagcagt
cacctgatgttaggcaaagagcagttagaggtttacctggccggtgaattacttgccgaa
gagttacgcatgactcagatggcactttctgagatcacaggtaaattcacctcagacgat
ctactcggaaagatcttcagctccttctgtatagggaagtaa
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