Shewanella psychrophila: Sps_05379
Help
Entry
Sps_05379 CDS
T05063
Name
(GenBank) pyruvate dehydrogenase E1 component, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00010
Glycolysis / Gluconeogenesis
spsw00020
Citrate cycle (TCA cycle)
spsw00620
Pyruvate metabolism
spsw00785
Lipoic acid metabolism
spsw01100
Metabolic pathways
spsw01110
Biosynthesis of secondary metabolites
spsw01120
Microbial metabolism in diverse environments
spsw01200
Carbon metabolism
spsw01210
2-Oxocarboxylic acid metabolism
Module
spsw_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Sps_05379
00020 Citrate cycle (TCA cycle)
Sps_05379
00620 Pyruvate metabolism
Sps_05379
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sps_05379
Enzymes [BR:
spsw01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Sps_05379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
AQS40448
UniProt:
A0A1S6HYD5
LinkDB
All DBs
Position
complement(6051938..6054598)
Genome browser
AA seq
886 aa
AA seq
DB search
MSEHMLQDLDPLETQEWLSALESVVREEGVERAQYLLEQVLDKARLDGVDMATGINTNYI
NTIPTSQEPAYPGNTTLERRIRSIIRWNAIMIVLRASKKDLDLGGHMASFQSSAAFYEVC
FNHFFRAPNDVDGGDLVYYQGHISPGIYSRAFVEGRLTADQLDNFRQEVDGEGIPSYPHP
KLMPEFWQFPTVSMGLAPMSSIYQARFLKYLHGRGLKDTSAQRVYAFLGDGEMDEPESRG
AISFAAREKLDNLCFLINCNLQRLDGPVMGNGSIIQELEGLFRGAGWNVVKVIWGNNWDS
LLAKDTTGKLLQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVSDMTDADIFALK
RGGHESSKLYAAFKNAQDTVGKPTVILAKTVKGYGMGGAAEGKNIAHQVKKMDMTHVLQL
RDRLGLQDLLTDENVAELPYLSLEEGSEEYKYLHARRDALHGYTPQRLPNFTKPLELPEV
DEFKPLLQEQKRDISTTMAFVRSLNILLKNKGVGQNIVPIIADEARTFGMEGLFRQIGIY
NPQGQNYTPQDREIVSYYKEATSGQVLQEGINELGAMSSWVAAATSYSTNDLPMIPFYIY
YSMFGFQRVGDMAWMAGDQQARGFLLGATAGRTTLNGEGLQHEDGHSHVQANTIPNCISY
DPTFAYEVAVIIQDGMRRMYGDQENVFYYLTLMNENYAMPAMPEGVEEGIRKGIYKLESY
KGSKQVQLMSSGTIMNEVRKAAKILSEEYDVASDVYSVTSFNELTREGQGVERYNMLHPE
AEQKQAYITQVMSTAPAIAATDYMKNYAEQVRAFMPSESFKVLGTDGFGRSDSRDNLRRH
FEVNAGYVVVAALTELAKRGDIEKSVVAQAIAKFNIDADKINPLYA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacatatgctacaagatctggatccattagagactcaagaatggttatctgct
ctagaatcagttgttcgcgaagaaggtgttgagcgtgctcagtatctactggaacaagta
ctcgataaggcccgtttagacggcgtcgatatggcgactggtatcaataccaactatatc
aacaccatccccaccagccaagagcctgcatacccaggtaatactacgctagagcgccgt
attcgttctatcattcgctggaacgcgatcatgattgtgctacgagcgtctaagaaggat
ttggatctaggtggccatatggcatctttccagtcttcagctgcattctacgaagtctgt
tttaatcacttcttccgtgcaccaaacgatgtagatggtggtgatttagtctattatcag
ggccatatctccccaggcatttattcacgtgcattcgtagaaggtcgcttaactgctgac
caactagataacttccgtcaagaagtcgatggtgaaggtatcccttcatatccccatcca
aaactaatgcctgagttctggcagtttccgactgtttctatgggtctggctcctatgtct
tctatctatcaggctcgcttcctcaagtaccttcatggtcgtggcttgaaagatacctct
gcccagcgtgtatatgccttcttgggcgatggtgagatggatgagcctgaatcacgcggt
gcgatttcatttgcggctcgtgaaaagctagataacctatgtttcctaattaactgtaac
ctgcagcgtctcgatggcccagtgatggggaacggcagcatcattcaggagcttgaaggc
ctgtttagaggcgcaggttggaacgtcgtcaaggttatttggggtaacaactgggattca
ctgttagccaaagatacgactggtaaattgttgcagttgatgaatgagactgtggatggt
gattatcagacatttaagtcaaaagatggtgcctacgtacgtgagcacttctttggtaag
tacccagaaaccgctgcgcttgtttcagatatgactgatgctgatatcttcgctcttaag
cgtggtggtcatgagtcatctaaactttatgctgcctttaagaacgctcaagatactgtt
ggtaagcctacagtgatcttggccaagaccgttaaaggttacggtatgggcggcgcagcc
gaaggcaagaacattgctcaccaggtgaagaagatggacatgacccacgtacttcaattg
cgtgaccgtctcggccttcaagacctgctgacagatgagaatgttgccgagctgccttat
ttgtctctagaggaaggttctgaagagtataaatacttacatgctcgtcgtgacgcactg
catggttacacgcctcagcgtctgcctaacttcactaagccacttgaactgcctgaagtt
gatgagttcaagccgctacttcaagaacagaagcgtgatatttcgaccactatggcattt
gttcgctcgctaaatatattattgaagaacaaaggcgtgggtcagaatattgtacctatc
atcgccgatgaggcgcgtacatttggtatggaaggcctgttccgtcagataggtatctat
aatcctcagggtcagaactacacaccacaagatcgcgaaattgtttcttactataaagag
gctacttcgggtcaggtactgcaggaaggtatcaatgagttaggtgctatgtcttcatgg
gttgctgcggcaacatcatatagcactaacgatttgcctatgatcccattctatatctat
tactctatgtttggtttccagcgtgttggcgatatggcatggatggcgggcgatcaacaa
gcgcgtggcttcctactcggtgctacagccggtcgtaccacattgaacggtgaaggtttg
caacatgaagatggccatagccatgttcaggcaaacacaattccaaactgtatctcttat
gatccgacattcgcctatgaagttgcggtcatcattcaagatggtatgcgtcgcatgtat
ggtgatcaggaaaatgtgttctattacctgactctgatgaatgaaaactacgccatgcca
gctatgcctgaaggcgttgaagaaggtattcgtaagggtatctacaagcttgaatcatac
aaaggtagtaagcaggttcagctgatgagctctggcactatcatgaacgaagtgcgtaag
gcggcgaaaattctaagtgaagagtatgatgttgcatctgatgtttactcggtcacttct
ttcaacgaattaactcgtgaaggccaaggtgtagagcgttacaacatgctgcatcctgaa
gctgagcagaagcaagcttacattactcaagtcatgagcactgcacctgcaatcgctgct
acagattacatgaagaattacgctgagcaagttcgcgccttcatgccgtcagaatcattc
aaggtattgggtaccgatggtttcggtcgttctgacagccgtgataacttgcgtcgtcac
ttcgaagtgaatgctggctatgtagtcgtcgcagcactgacagaactagctaaacgtggt
gatattgaaaaatctgtagtggctcaggccatcgctaaatttaatattgatgcagataag
atcaacccgctatacgcgtaa
DBGET
integrated database retrieval system
