Sporosarcina psychrophila: AZE41_01395
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Entry
AZE41_01395 CDS
T04327
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AZE41_01395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsy03021
]
AZE41_01395
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_01395
Enzymes [BR:
spsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AZE41_01395
Transcription machinery [BR:
spsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AZE41_01395
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AZE41_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AMQ04727
UniProt:
A0ABV2K8L5
LinkDB
All DBs
Position
316454..319987
Genome browser
AA seq
1177 aa
AA seq
DB search
MTGHLVQYGQHRQRRSFARISEVLDLPNLIEIQTASYEWFLEEGLLDMFRDISPIQDFTG
NLSLEFIDYTLGDPKYPVEESKERDVTFAAPLRVKVRLHNKETEEVKEQDVFMGDFPLMT
ENGTFVINGAERVIVSQLVRSPSVYYSDKTDKNGKRGFGATVIPNRGAWLEYETDAKDVV
HVRIDRTRKLPVTVLLRALGFSSDQEIIDLIGDNEYLRNTLEKDNTESSEKALLEIYERL
RPGEPPTLDSAKNLLFSRFFDAKRYDLANVGRYKMNKKLHAQNRLFNQVVAETLVDPETG
EILLEKDQLIDRRALDRLLPHLEKGIGFEEITHASGVLDEKITIQSIKIYSPKSEEKQVI
NVISNAYVDDSIKHVTPADIVASISYFFNLLHGVGNTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVKERMSINDTQSIVPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTFAKVNKFG
FIETPYRKVDPISGRVTSRIDYLTADVEDNYVVAQANAILAEDGSFVSEGVVGRFQGDNT
VFKREQIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPESPFVGTG
MEHISARDSGAAVLAKFDGIVEHVEAREIRVRRIETVDGKEVKGDLTIYRLENFIRSNQG
TCYNQRPICSVGDRVKPLDILADGPSMEQGELALGRNVLMAFMTWDGYNYEDAIIMSERL
VKDDVYTSVHIEEYESEARDTKLGPEEITRDIPNVGEDSLRNLDDRGIIRIGAEVRDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLKVPHGAGGIVLDVKVFNREDGDEL
PPGVNQLVRAYIVQKRKISVGDKMAGRHGNKGVISRILPEADMPYLPDGTPIDLMLNPLG
VPSRMNIGQVLEMHLGMASRTLGIHMASPVFDGANEQDVWETMEEAGMDRDGKTILYDGR
SGEAFDNRVSVGVMYIIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGESVPQPGVPESFKVLIKELQSLGLD
VKMLSIDFEEIELRDLDEDDDMQPTDALNLIKENQPV
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcatttagttcagtatggtcaacaccgtcagcggagaagtttcgcacggatc
agcgaagtgctcgatctgccgaatctgattgaaatccagacggcatcttatgagtggttc
ttagaagaaggactgctggatatgttccgcgatatttctccgattcaagactttacggga
aatctatcgttggagttcatcgattatactcttggggatcctaaataccctgtagaggaa
tcgaaagagcgtgatgtaacgtttgcagcgccgctacgtgtaaaagttcgtctccacaat
aaagagacggaagaagtaaaagagcaagatgtctttatgggtgatttcccgctcatgaca
gaaaatggtacatttgttattaatggtgcggagagggtaattgtctcccagctcgtccgg
tctccaagtgtttattacagtgataaaacggacaaaaacggtaaacgtggtttcggtgca
actgttattccgaatcgcggtgcttggcttgagtatgaaacagatgcaaaagatgttgtt
cacgtccgcattgatcggacacgtaagttgccagttacagtactccttcgtgcactcgga
ttctcatccgaccaggaaatcattgatttaatcggtgataatgagtatttgcgcaacaca
cttgaaaaggacaacactgaaagctctgaaaaagcattgcttgagatatacgaacgtctt
cgtccaggtgagccaccaacactagatagcgcgaagaaccttttgttctcacgatttttt
gatgcaaaacggtatgatttagcgaatgtaggtcgctataagatgaataagaagcttcat
gcacaaaatcgcttgttcaaccaggttgtcgctgaaacacttgtcgaccctgaaactggt
gaaattctgcttgaaaaagaccaactcatcgatcgccgtgcattggaccgtcttcttccg
catttggaaaaaggaatcggtttcgaagagatcactcatgcaagtggagttcttgacgaa
aaaataacaatccagtccatcaaaatttattctccgaaaagtgaagaaaaacaagtaatc
aacgtaatatcgaacgcgtatgtcgatgattctatcaagcatgtaacgccggcagatatc
gttgcttcaattagttatttcttcaaccttcttcatggtgtgggtaacacggatgatatc
gatcatctcggtaaccgtcgtctacgttcagtgggtgaacttcttcaaaaccagttccgt
atcgggctttctcgtatggaacgtgtcgtaaaagaacgtatgtccattaatgatacgcag
tcaatcgtaccgcaacagctgattaatattcgccccgttatcgcatctattaaagagttc
tttggtagttctcaactttctcagttcatggatcagacgaatccgcttgccgaattaaca
cataaacgcaggctgtctgcacttggacctggtggtttgacaagggaacgtgcaggaatg
gaagtacgtgacgtgcattactcccattacggacgtatgtgtccaattgaaacaccagag
ggaccgaatatcggactgattaactcactctctacgtttgcgaaagtgaataagttcgga
tttattgaaacgccatatcgaaaagttgatcctatctctggtcgggtcacttctagaatc
gattacttgactgcggatgtagaagataattacgtcgtagcacaagcaaacgcaatactt
gctgaagatggttcttttgttagtgaaggagtcgtcggtcgtttccaaggggataacact
gtctttaaacgcgaacaaattgactacatggacgtttcgcctaaacaagtagtttctgcg
gcaacagcatgtattccattccttgagaatgatgactcgaaccgtgcccttatgggagcg
aacatgcaacgtcaagcagtccctcttctcaatccggaatcacctttcgtaggaactggt
atggaacacatatcagcacgcgattcaggtgcagctgtacttgcgaagtttgatggaatt
gtcgaacatgtcgaggctagagaaattcgtgttcgtcgtattgaaacagttgatggaaaa
gaagtaaaaggcgatcttacaatataccgtcttgaaaactttatccgttcgaaccaaggg
acatgttataaccaacgtccaatttgtagtgtaggggatcgcgttaaacctcttgatatt
cttgcagatggtccttcaatggagcaaggagagctagcgcttggtcgtaacgttctgatg
gcatttatgacatgggacggctacaactatgaagatgcaataatcatgagcgaacgtctt
gtgaaagatgatgtctatacttcggtccatatcgaagaatacgaatctgaagcgagagat
acgaaacttggtcctgaagaaattacgcgcgacattccgaacgttggtgaagattcgctt
cgtaacttggacgaccgtggaattattcgtatcggagccgaagttcgtgatggtgatatt
cttgttgggaaagtgactccgaaaggcgtaactgaactgactgctgaagaaagactttta
catgctatttttggtgaaaaagcacgtgaagtccgtgatacatccctcaaagtaccgcat
ggcgcgggtgggatcgttctagatgtgaaagtatttaatcgtgaagatggcgatgaattg
ccaccgggcgttaaccaattggtccgcgcatacatcgttcaaaaacggaaaatttccgtt
ggggacaaaatggctggacgtcacggaaacaaaggggttatttcccgcatcttacctgaa
gcggatatgccttatttaccggacggcacaccaattgacctcatgcttaacccgcttggt
gttccatcacgtatgaacatcggacaggttcttgaaatgcatcttggcatggcatctcgt
actctcggcatccatatggcgtctcctgtatttgatggggcgaacgaacaggatgtttgg
gaaacgatggaagaagccgggatggatcgtgacggaaaaactattctgtatgacggtcgt
tcaggagaagctttcgataaccgtgtatcagtcggtgtcatgtatattatcaaactggcc
cacatggtcgacgataaacttcacgcccgttcaacaggaccatactctctcgtcacacag
caaccactgggcggtaaagctcagttcggtgggcaacgtttcggtgagatggaagtgtgg
gcactcgaagcctatggggcagcttatacgcttcaagagattctgactgtgaagtcggat
gacgtcgtaggacgcgtgaagacgtacgaagcgattgttaaaggtgaaagtgttccacaa
ccaggtgttccagaatcctttaaagttcttataaaagaacttcaaagtcttggtttggat
gttaagatgctatcgattgattttgaagaaatcgagttacgcgatcttgatgaagacgat
gatatgcaaccaacagatgctttgaatcttataaaagaaaatcagcctgtttga
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integrated database retrieval system
