Sporosarcina psychrophila: AZE41_15295
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Entry
AZE41_15295 CDS
T04327
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZE41_15295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spsy03019
]
AZE41_15295
03016 Transfer RNA biogenesis [BR:
spsy03016
]
AZE41_15295
Enzymes [BR:
spsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AZE41_15295
Messenger RNA biogenesis [BR:
spsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AZE41_15295
Transfer RNA biogenesis [BR:
spsy03016
]
Prokaryotic type
tRNA degradation factors
AZE41_15295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Blo-t-5
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AMQ07185
UniProt:
A0A127W0T1
LinkDB
All DBs
Position
complement(3205029..3207146)
Genome browser
AA seq
705 aa
AA seq
DB search
MTEKKVYTLDWAGRPLTIETGQLAKQANGAVLVRYGETTVLSTATSSKNSRGLDFFPLTV
NYEERMYAVGKIPGGFIKREGRPSEKAVLTSRLIDRPIRPLFADGFRNDVQVISLVMSVD
QDCSSEMAAMLGSSLALSISDIPFEGPIAGIQIGLIDGKFIVNPTPAQLEKSELDLVVAG
TKDAINMVEAGAQEVAEDIILEAIMFGHGEIIKLIEFQEKIIAEVGKAKTEVALFTLDET
IMSDIKNSCETDLVNAIQTVEKHAREDAINAVKNEVIERYKENEADDATMKQVKGVLDYM
VKEEVRRLITDEKIRPDGRGLDEIRPLASEVGILPRTHGSGLFTRGQTQALSVCTLGALG
EVQIIDGLGLEETKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALSAVIPNDTD
FPYTIRLVAEVLESNGSSSQASICASTMAMLDAGVPLKAPVAGIAMGLVKKGDNYSVLSD
IQGMEDHLGDMDFKVAGTDKGITALQMDIKIDGLSREILEEALTQAKVGRLKILNHMITA
ISGPREELSEYAPKIIVIKINPDKIRDVIGPGGKVINKIIEETNVKIDTEQDGTIYISSP
NNEMNTKAKAMIENIVREAKVGEYYMAKVKRIEKFGAFLELFPGKDGLLHVSEIAEERTK
VVEDVLKMGDEMFVKVTEVDNQGRVNLSRKIVILEEKEAAEKANS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaaaaaagtttatacactagattgggcaggacgaccgttgacaattgaaacg
ggacaacttgctaaacaggctaacggagcagtacttgtacgctacggggaaacaacagta
ctttcaactgcaacatcttctaaaaattcacgaggattagatttcttccctcttacagtg
aattatgaagaacgcatgtatgctgttgggaaaattccaggtggcttcattaaacgtgaa
ggacgtccatcagaaaaagcggtcttaacgagccgactaatcgaccgtccaatccgtcct
ttattcgcagacgggttccgcaatgatgtacaagttatttcacttgttatgtcagttgat
caagattgttcatctgaaatggcagcaatgctcggttcttcacttgcattgtcgatttct
gacattcctttcgaaggaccaatcgctggtattcaaattggattaatcgacgggaaattc
atcgttaacccaacaccggcacaattggagaagagtgaacttgaccttgttgtcgctggt
acgaaagatgcgatcaacatggttgaagcaggcgcacaagaagttgcggaagatatcatt
cttgaagcaattatgttcggacacggtgaaatcattaaactgattgaattccaagaaaaa
atcattgctgaagtcggcaaagcgaaaacggaagttgcactattcacattggatgaaaca
attatgtccgatattaaaaatagctgtgaaaccgatcttgttaatgcaatccaaactgtt
gagaagcatgcgcgtgaagatgctatcaatgcagtgaaaaacgaagtaatcgaacgctac
aaagaaaacgaagcggacgatgcgacgatgaaacaagtaaaaggcgttttggattatatg
gttaaagaagaagtacgtcgccttattacggatgaaaaaatccgtcctgatggccgtggc
cttgacgaaattcgtccacttgcatctgaagtaggcatcttgccacgtacgcacggttca
ggtctctttactcgcggacaaacgcaagcgcttagtgtttgtacacttggagcccttggt
gaagtacaaatcatcgatggtcttggtcttgaagaaacaaaacgtttcatgcaccattat
aacttcccgaacttcagtgttggtgaaacgggtccaatccgtggaccaggacgtcgtgaa
attgggcacggtgcacttggggaacgcgcattatcagcggttatcccgaatgatactgat
ttcccgtacacaattcgtctagtagctgaagtactcgagtcaaacggttcatcttcacaa
gcatcgatctgtgcgtcaacaatggccatgttagatgcgggtgttccacttaaagctcca
gttgcgggtatcgcaatgggtcttgtgaaaaaaggggacaactactctgttctttccgat
attcaagggatggaagatcatcttggcgatatggacttcaaagtagcaggaactgacaaa
ggaatcactgcgcttcaaatggatattaaaatcgatggtctttcacgtgaaatcttggaa
gaagcattgacacaagcaaaagtaggtcgcttgaaaattttaaaccatatgatcacagca
atttcaggaccgcgtgaagagctttcagaatatgctccgaaaattatcgttatcaaaatc
aatccagacaagattcgtgacgtaattgggccaggcggaaaagtcatcaacaagatcatc
gaagagacgaatgttaaaatcgatactgaacaagatggtacgatttatatctcttctcca
aacaatgaaatgaataccaaagcgaaagcgatgattgagaatatcgttcgcgaagcaaaa
gttggcgaatactatatggcgaaagtgaaacgcattgagaaattcggtgccttccttgaa
ctattcccaggtaaagacggactgctccacgtttctgaaattgcagaagagcggactaaa
gtggttgaagatgtcttgaaaatgggcgatgaaatgttcgtaaaagtaactgaagttgat
aaccaaggacgcgttaacttgtctagaaaaattgtcattcttgaagaaaaagaagcagct
gaaaaagcgaatagctga
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