Sporosarcina psychrophila: AZE41_17030
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Entry
AZE41_17030 CDS
T04327
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spsy
Sporosarcina psychrophila
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_17030
Enzymes [BR:
spsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZE41_17030
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AZE41_17030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_22
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMQ08621
LinkDB
All DBs
Position
complement(3559564..3563271)
Genome browser
AA seq
1235 aa
AA seq
DB search
MHIPVKPEGLTFTDAQWKAIWATGKDILVSAAAGSGKTKVLITRMIEKVLDENNPIDVDE
LLVVTFTNASAAEMRHRMAEALEEAIAARPESVHLRRQLNLLNKAQISTLHSFCMNVVGQ
YAYLIDIDPGFRIADSTEAALLSDDTIGAVLEDAYSAENPEAMYRLADSFTSDRNDQSIE
TLIDRLYDYSRVHPVPEQWLREIPMQYEIGDQASIDDLEFIEPLKTAILHTLEEAAALTG
DMRNIALMVDGPEPLAATAEADLMWINEAIRRITDGTWEEMYAFFGSLKWAKAGTIRKDS
CDEELAKRAKALRDAVKKIINTLKESYFTRTPARLLDEIRLMATTMHTLIDLVIDFGRRF
EQVKIDRGIVDFSDLEHYALRILSNVQDGELVPSDIAVDYKNRFSEVLVDEYQDVNMLQE
TIIQLVKRGGEEDGNLFMVGDVKQSIYRFRLAEPMLFLGKYNRFTATDGHQGLKIDLNAN
FRSRKEVLDATNFVFSQVMGARVGEIEYDDAAALKYGANYPEKAVTAGLTLLYEEEEDEQ
ELDDATELAGQSLKSSQAEARFMIKKIQDMIASGAEVTDAFSDKKRPLEYRDIVILMRSM
TWSGEIAEEFKLAEIPIYAELKRGYFDALEVMIMLNTLRVIDNPYQDIPLASVLRAPFIG
MTENELAQIRLAGKSEPFFEALKRFVTTGGAGVATATQEKLLRFFNQFEDWRNLARRGSL
SELIWQVYSDTHYYEMVGAMANGKQRQANLRALHDRAIDYEKTSFRGLFRFLRFVDRMRK
RGDDLGAARSLTEKENVVRIMTVHSSKGLEFPFVFIAGAGRKFNKMDFNEPYLFDQHFGL
AVKAIDPDNRITYTSLPFLAMKEKKELEMRAEEMRVLYVAMTRAKEHLEIIASVKDIEKS
IVKWQDAQLVDPELMLPEYTRSRANGYLDWIGPAVARHPAFAKFGSIPGGQSVIDASVWQ
IDALPVSALFSKLGDSDEEPVKSLDVVPIEEVDEGMLLEVKRRFDATYPHLPSVTKRSKQ
TVSELKRLSILEQQADDDLFVSTNADVSTAYLHNRPAFMQSRALSAAEVGTAMHTIMQHI
DIQKESSVTDVEKLLTDLTVRQLLTTEEAIAVDANTVAHFFKTSIAKRLMKAEKVERELP
FTYAFDDNDGDYQILQGIADCLFEEQDGWVLLDYKTDRVSGRFGSDEEVDAEMQVRYGIQ
LNLYKKAIEEIVKIDIKEMVLYLFDGHRTINIQGE
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcacatacccgtgaaacctgagggactaacatttactgacgcccagtggaaagcaatt
tgggcgacagggaaagatattctcgtttccgctgccgctggttcggggaaaacgaaagtg
ttaatcacacgaatgattgaaaaagtactggatgaaaataatccaatcgatgtcgatgaa
ctgctcgttgtgacatttaccaatgcctctgctgcagagatgcgacacaggatggcggaa
gcgttggaagaagcgattgctgcaaggccggaatccgtccacttgcgcaggcagttgaat
ttattgaacaaagcacagatttccacactgcactcattttgtatgaacgtcgttggacaa
tatgcttatttaatcgatatcgacccgggattccggattgcggatagtacggaagcggcg
ctgttaagtgacgatacaattggggctgtccttgaagatgcttatagtgcggaaaatccg
gaagcaatgtaccggctagcagatagttttacgtctgaccgcaacgatcagtccatcgaa
acactgattgaccgcttgtatgattattcccgcgttcatccggtaccggaacaatggttg
cgcgaaattcccatgcaatatgaaataggtgaccaagcttctatcgatgatcttgaattt
atcgaaccgctgaaaacggctattctccatacgcttgaagaagcggcggcgttaactggc
gatatgcgaaacattgcgctgatggtggacgggccggaaccacttgctgctacggctgaa
gcagatttgatgtggattaatgaagcaattcgacgcatcacggatggtacatgggaagaa
atgtacgcattttttggctctctcaaatgggcaaaggcggggacaatccgcaaagattcg
tgtgatgaagaacttgcaaaacgagcgaaagcgctgcgtgatgcggtgaagaaaattatt
aatacgttgaaagaatcttatttcacgagaacaccagcccgtttattggatgaaattcgc
ttgatggcgacgaccatgcatacgctcattgacttagtgatcgacttcggcaggcgtttt
gaacaagtgaaaattgaccgagggattgtcgatttctcagatttagagcattatgcgcta
cggattttatcgaatgttcaagatggagaactggtgccttctgatatcgcagttgactac
aaaaatcgcttttcagaagttcttgtcgatgaataccaggatgtcaatatgttgcaggag
acgattatccagctcgttaagcgcggcggggaagaggatggcaatctgttcatggttggc
gatgtaaaacagtcaatttaccgcttccgtcttgctgaaccgatgctgtttcttggtaaa
tacaatcgatttacggcaacggatggccatcaaggcttgaaaatcgatttgaatgccaac
ttcagaagtcgtaaagaagtgctcgatgcgacaaatttcgtcttttcacaagtgatgggc
gcgcgtgtcggagaaattgaatacgatgatgcggcggcgttgaaatatggcgctaactat
cctgaaaaagccgtaacagctggtttgacgttgctctatgaagaagaggaagatgagcag
gagctagacgatgcaacggaattagcaggccaaagcttgaagagttcgcaggcggaagca
cgatttatgataaaaaaaatccaggatatgattgcatcaggcgctgaagtaactgatgca
ttcagcgataaaaagcgtccacttgaatatagagatattgttattttgatgcgttcaatg
acatggtcaggtgaaatcgcagaggaatttaaactagcggaaattccaatctatgctgaa
ctaaaacgcggttatttcgatgcgttagaagtgatgattatgttgaatacattgcgtgtc
atcgataatccctatcaggatattccacttgcatccgtcctccgtgctccgtttatcggc
atgacggaaaatgaattggcacaaattcgtcttgccggaaaaagcgaaccgttctttgaa
gcgttgaagcgtttcgttacaacaggcggagcaggtgttgcaacagcgacacaggaaaaa
ctgctacggtttttcaatcagttcgaggattggcgtaacttggcacgacgcggttcgttg
tccgaactaatttggcaagtctattccgatacgcattactacgaaatggtcggtgcaatg
gcaaatggtaaacagcgccaggccaatctacgagcgctgcatgaccgtgcaatcgattat
gaaaaaacgtcgttccgtgggctgttccgttttctacgtttcgttgaccgtatgcgaaaa
cggggcgatgatctcggtgccgcacgttcgctaacagaaaaggaaaacgttgtccgtatc
atgaccgtccattcatcgaaaggattggagtttcctttcgttttcatcgcaggggcgggt
cggaaattcaataagatggatttcaatgaaccgtatttgttcgaccagcattttggtctg
gcagtgaaagcgattgatccggacaaccggattacctatacatccttgccgtttcttgca
atgaaggaaaagaaagaacttgaaatgcgtgcggaagaaatgcgtgtgttatacgttgct
atgacacgggcgaaagaacatcttgaaattattgcttccgtaaaagatatcgaaaagtcg
attgtaaaatggcaagatgcccagctagtcgaccctgaactgatgttgcctgagtatacg
aggtcacgtgcaaacggttatttagactggattggtccagcagtcgcgagacatccggca
tttgcgaaattcggaagtatcccgggaggtcagtctgtaatcgatgcctcagtttggcag
atagatgcgctgcctgtttcggcattatttagtaagcttggagatagcgatgaggaacca
gtgaaatcattggatgtcgttccaattgaagaagtcgacgaggggatgttgctggaagtg
aaacgcaggtttgacgcgacatatccacatcttccatcggtaacgaaacggtctaaacag
acggtcagtgagttgaaacggctgtcgattctagaacaacaggcggacgatgatttgttt
gtgtctacgaatgcggatgtcagtacggcatatctccataatcgaccagccttcatgcaa
tcacgggcactatctgcagcggaagtcgggacggcgatgcatacgattatgcagcatatc
gatatccagaaagaaagtagtgtcactgatgttgagaagctcctaacagatttgacggtc
cgccagttactgactacagaagaagcgattgcagtcgatgccaatacggttgcacatttt
ttcaaaacgtcgattgcaaaacggcttatgaaagctgagaaagtagagcgcgaattgccg
tttacgtacgcttttgatgataacgacggggattaccaaatattgcaagggatcgcggat
tgtttattcgaagagcaagatggttgggtcctgctagattataaaactgaccgagtcagc
ggacgctttggttctgatgaagaagtcgacgcagaaatgcaggtccggtatggcatccag
ttgaacctgtacaagaaagcgattgaagaaattgtgaaaatcgacattaaagagatggtc
ctttatttatttgacggacataggactataaatattcagggggaataa
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