Sphingobium sp. TA15: Sj15T_25720
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Entry
Sj15T_25720 CDS
T11324
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
spta Sphingobium sp. TA15
Pathway
spta00900
Terpenoid backbone biosynthesis
spta01100
Metabolic pathways
spta01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Sj15T_25720
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
spta01006
]
Sj15T_25720
Enzymes [BR:
spta01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Sj15T_25720
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Sj15T_25720
Prenyltransferases [BR:
spta01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Sj15T_25720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDD67551
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All DBs
Position
1:complement(2613795..2614712)
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AA seq
305 aa
AA seq
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MSGGSASPPATGLVAGRAAAVAADVDRLFDRLLAVPDDPRRRLYEAMRHAAMDGGKRLRP
LLVQAASDLFNISRESALRVGVAVECIHVYSLVHDDLPAMDDDDMRRGKPTVHRAFDEAT
AILAGDCLHDLAFEILADEETHPDPFVRIELVKALAVASGTSGMAGGQMMDLEAEKASFD
LPTVTRLQQLKTGALIAVCVDAAAIMALIPPEGRMRLHGYARDIGLAFQIADDLLDVEGD
AVLAGKALGKDAAAGKETFVSLLGVERAREQARLLVEQAKAHLHGHGPEADLLRAIADYI
VERDR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggggttccgcctcgccccccgcgacgggcctggtggccggccgcgcggcggcc
gtggcggccgatgtcgaccgcctgttcgaccggctgctggcggtccccgacgatccgcgc
cgccgcttgtacgaggcgatgcgccatgccgccatggacggcggcaagcggctgcgcccg
ctgctggtgcaggcggccagcgacctgttcaacatctcgcgggagtctgcgctgcgggtc
ggcgtcgcggtcgaatgcatccatgtctattcgctggtgcatgacgatcttccggcgatg
gacgatgacgacatgcgccggggcaagccgaccgtgcacagggcgttcgacgaagcgacg
gcgatcctggcgggcgactgcctgcacgacctggctttcgagatattggcggacgaggaa
acgcatcccgaccccttcgtccggatcgaactggtgaaggcgctggccgtcgccagcggc
accagcggcatggcgggcggtcagatgatggacctggaggcggagaaggccagcttcgac
ctgcccacagtcacccggctccagcagttgaagaccggcgcgctgatcgccgtctgcgtc
gatgcggcggcgattatggccctcatcccgccggaggggcggatgcgcctgcacggctat
gcccgcgacatcggccttgccttccagatcgccgacgacctgctggacgtggagggggac
gccgttctcgccggcaaggcgctgggcaaggacgcggcggcggggaaggaaaccttcgtc
tcgctgctgggggtggagcgggcgcgggagcaggctcgcctgctggtggaacaggccaag
gcgcatctgcacgggcacgggccggaggcggacctgctgcgcgccatcgccgactatatt
gtggaaagggatcgctag
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