Strongylocentrotus purpuratus (purple sea urchin): 580680
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Entry
580680 CDS
T01019
Name
(RefSeq) Y-box factor homolog isoform X1
KO
K09276
Y-box-binding protein 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spu03000
]
580680
03019 Messenger RNA biogenesis [BR:
spu03019
]
580680
03041 Spliceosome [BR:
spu03041
]
580680
Transcription factors [BR:
spu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
580680
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
580680
mRNA cycle factors
Common to processing body (P body) and stress granule
580680
Spliceosome [BR:
spu03041
]
Common components
Common spliceosomal components
General mRNP proteins
580680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
580680
NCBI-ProteinID:
XP_030843108
UniProt:
A0A7M7NXF6
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MSEGQEEQPQTIEAPEKIVLATKVSGTVKWFNVKNGYGFINRDDTKEDVFVHQSAIVRNN
PRKYQRSVGDGEVVEFDVVEGTKAKGNEAARVTGPEGAPVVGSKYAADKRRYRGRPRYYR
RRRPRNSQGDEEEIPSDEKEGGEENDGPKEGRRQYRDGGRGGYRGGRRRYRGGRRPRPGQ
DGAPPDGEQNEEEGERQDREGDDKSNSNRRRRYRPNQRYNNRRPSPVATRMRKVVIGRTG
KEVRRGKVARINNVGGQDVLTVVATTIVKVPQQGRGRGPRRREPRRGEPRREPRGDRRRP
ERALGQTGHQGGAICSSRYQGQHQG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagggccaagaagaacagccccagaccattgaggctccggagaagatcgttttg
gccacaaaagtttcaggaacagtcaagtggttcaacgtcaagaatggctatgggttcatc
aaccgagatgacaccaaggaggatgtattcgtccatcagtcggccattgtaaggaacaac
ccacgcaagtaccagcgcagtgttggtgacggagaagtggtagagtttgacgttgtagaa
ggaaccaaggccaagggcaatgaagccgcccgagtgactggtcctgagggtgccccagta
gtagggagcaagtacgcggccgacaagcgccgttaccgcggccgcccccgctactaccgc
cgtcgcagaccccgtaactcgcagggagatgaggaggagattccctcggacgagaaggag
ggaggagaagagaacgacggtcccaaggaggggaggagacagtaccgtgacggaggtagg
ggaggctatcgtggtggtcgtcgaaggtatagaggtggacgtagaccaagaccgggccag
gatggagcaccgccagacggggagcaaaatgaagaggaaggcgagcgacaggatagggaa
ggcgatgacaagtcaaacagcaaccgccgtcgccgataccgtcccaaccagagatataac
aaccgccgccccagtcccgtggcgaccagaatgaggaaggtggtgatagggagaacgggg
aaggaggtgaggagagggaaggtggcgaggatcaacaacgtaggaggccaagacgtcctt
accgtcgtcgctacaacaatcgtaaaggtgccccaacaaggacggggaaggggaccaagg
aggagagaaccaaggaggggagaaccaaggagagaaccaaggggagacaggaggaggccg
gaacgagccctcggacagaccggtcatcaaggaggagccatctgctccagcagataccaa
ggccagcatcaaggttga
DBGET
integrated database retrieval system
