Strongylocentrotus purpuratus (purple sea urchin): 591524
Help
Entry
591524 CDS
T01019
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
591524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
591524
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
591524
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
591524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Gp5_trimer_C
Motif
Other DBs
NCBI-GeneID:
591524
NCBI-ProteinID:
XP_030831660
UniProt:
A0A7M7N6C1
LinkDB
All DBs
Position
Unknown
AA seq
2501 aa
AA seq
DB search
MNLDSLSLAFSQVTNLVANLNKKNYKQSVGEISRLVSHNGPEADRHLLRCLFSYIDFCDG
KSSGKDFYETQLLIQECSLLITKPNFISTLCFAIDNPLHQQKSLRPSQQLFTQLSKILKL
TSVQEVVFGLALTHSVKPETRSLALQFVKQKLPDLVRAYIDADIRNQQESGLADFSVEIL
QLLLTHLLYRSPDHLGLGSVQLEAFLKTLKKEFPPERVPVVLAPLLYGDKQDIHMDRVIS
DSIAIPKGVMDGSLAELMQEMGYSCCATVEECHKTLVQFGINGLTASNVAKVIGMMARTH
TGLMDNLPLQSVSGASVWSDGKDKQDQAGQLSTWDVDTFIKVVRELAPHINFKEVVFELD
HQGFYIGESQGLRLVKTALIRGLQQDVFPVEALYRVWKNFEGQLSWIQQALAQPDIFCFA
DYPCHPVVIDILKAPPEEENRKIATWKSLELVEVLLKLSETGKYEQVKNLFSFPIKHCPD
MLLLALLQVQPTMTPLRLELIAVLMPIFLGNHPNSGIVLHYAWHGQGQSPTIRQIVMHSM
ADWYMRGDSDQTRLSRILDVAQDLKALSLLLNATPFLFVIDLACLASRREYLKLDKWMTD
KIREHGQESFVQTCVKFLKRRAPQVMGGIAPEPRELPGGGKTGVLPPETIGTMLACLQAC
VSSVSPELAETIMNMVANCGNLLKSRPPPGVMNNQGMPPISPGPVTPIDSLPGMPPLGST
MGTSIGSNMGSTMGSNMGSAIGSNMNSAIGSNMGSAIGSNMNSAIGSNMGSAIGSNMNSA
IGSNIGSGMGSNMNSAIGSNIGSGMGSNMGSAIGSNIGSGMGSNMGSAIGSNMGSAIGSN
MNSAIGSNMGSAIGSTMGSTMGSSASSMTTPNLHPFSSNPLGSSFGQPPQSPQKTFPMLS
GPGPNLGGLINPTQSSSHPTGKSDISNIWPELNQSFSPEIDEEANSYFQQIYNQPPNPIM
SVDDVLQMLKQFKDSQVTREREVFMCMLRNLFEEYKFFPQYPERELLITACLFGGVIEQG
LVTFMALGMALRYVLEALRKPHNSKMYMFGIAALDKFKLRLKDFAQYCTHVASIPHFKQF
PEHLIEYVTYGQQSMEPPVTSRPQPTPTTTPATVTTTASSILSTTKPTPATTTVSAIKPI
AKAAPKPSIANTTNIDTLLVATPSEEIKEPSEQVQDKIFFIFNNLSQVNLVQKCEEMKEL
CSEEHLDWISRYLVLKRASIETNFHTLYSNFVDQIKLNKLADMVLKETYRNIGVLLASSK
SDSNFSDRTLLKNLGHWLGKLTLAKNHPILQVDLDMKALILEAYHKGQAELLYVVPFVAK
VIESCTKSRIFKPPNPWTMAILNVLGELHQEPNLKLNLKXEVEVLCKAFNVTMDDLKPGM
YLKDLEMVGLIPHKLTTSKKFMEGGAFGISVGMGQDNPSSSVGGLAAGLASGLAVPLPTV
PNSSLVGVGEQGIASSVPTPPTPSLPASQAPVPQFSFQDLNTSALTGIAPLTTVNAQLAI
FQAHPQLRNCVRPAVERAVQELVHPVVDRSIKIALSTCEQIVKKDFALDPEENRMRLAAH
HMVRNLTAGMAMITCHEPLIFSIINNFKLSCIAALKGGTQQQKELIEQAASVVANDNVEL
ACCFIQKCAVEKAIPEMDRRLATEIELRKHARNENRRYCDPVVLTYQAERMPEQIRLKVG
GVPQGQIAVYEEFARSIPGFLPTPEANQPPGFLAKLTQSYAVDEITQIYDKCITEIDQHL
QFISQVMPQSQHIQILHALLESVMVARNSREIVTALACLQKAVEGLLEGYTVSSLDPNAA
LRYRDAHILVLKSLQDQRAYGPQWTNKQVTRVVCETSSERKYNLDAIEQLLRTHLVNLQT
IDMHIATSMENGLNYAAVGFAMSVVKRFLIDEKQSNVLNEADLYNTLHVLARIATQSPNP
PEGLPQLIELVRQNHDPAFLDKAPGGPTSMMHSGISQAREFDDPPGLREKTEYLLREWVN
MYYSPAGGKDSTKAFSAFVNQMHQQGILKTDDLITRFFRLSIELCVDVCYRALAEQVHSQ
ALTRAKCFQTLDAFVRLIALLVKHSGDATNPVTKINLLNKVLGIVAGVLLQDHEVRQTEF
HQLAYHRIFSMLLLELNAPEQILEAINFQVMSAFCNALHVLRPSKAPGFVYAWLELISHR
IFIARMLGMLPQQKVRLEGWPMYAGLLTGLFKFMTPFMRNAELPKHLALLYKGTLRVLLV
LLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLADIAHH
PRILTNYVTVIQPASFKKDLDSYIKTRSPVTFLSELRSHMQVSQEPGQRYNVSLMNALVL
YVGMQAINYIQSKGSTPSMSTITHSSHMDIYQNLVVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIRNHHFKFWSH
EFVHCAPEIKKLFESVARSCMQQKGTAQPGMGRDNAEAHET
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggattccctgtcgctggccttttctcaggttaccaatcttgtggccaatctc
aacaaaaagaattacaagcaaagtgtcggggaaatctctcgcctcgtttctcacaacggg
ccagaggcagacaggcacttgctgcgctgcctcttctcctacattgacttttgtgatggt
aagagcagcggcaaagacttctacgagactcagctgttgatacaggagtgctccttactc
atcaccaaacctaatttcatctcaactttgtgctttgccatcgacaaccctctgcatcag
cagaagagtctaaggccaagccagcagttgttcacccaactgagcaaaatcttaaagctc
acttcagttcaagaagttgtctttggtcttgctctgacccattcagttaaacctgaaacc
agatcactagctctccagtttgtgaagcagaagttacctgatcttgtccgtgcttacata
gatgccgatattcgtaaccagcaggagagtggattggcagacttttctgtggagatactg
cagctgctcctgacccaccttctctaccgatcacccgatcatctgggccttgggagtgta
caactagaggctttcctcaagactctcaagaaagaatttccgcctgagcgagtacctgtg
gtgcttgctcccttgttgtatggtgacaaacaagatattcatatggacagagtgatttct
gacagcatagcaatacctaaaggagtgatggatggctctctggcagagcttatgcaggag
atggggtacagctgctgtgccacggtggaggaatgccacaagacccttgtccagtttggc
atcaatggcttgaccgcaagcaatgtggccaaggtcatcggtatgatggccaggacccac
acaggccttatggataaccttccacttcagtcggtgtctggggctagcgtgtggagcgat
ggcaaggacaagcaggaccaggccgggcagctgtccacctgggatgtggacaccttcatc
aaggtggtgagggagcttgccccacatatcaacttcaaggaggtggtgtttgaacttgac
catcaagggttctacatcggcgagagccaggggctgaggctggtcaagacggcgttgatc
aggggtctgcagcaggatgtcttccctgtggaagccctctacagagtctggaagaacttt
gaaggacagctatcctggatccaacaagccctggcccagccagacatcttctgttttgct
gactacccatgtcaccctgtggtcattgacatcctaaaggcaccgccagaagaggagaac
agaaagattgctacatggaaatcccttgagcttgttgaggtgctgctgaagttgtcagag
actgggaagtatgaacaggtcaagaacctatttagcttccccatcaagcattgccctgac
atgcttcttctagccttgcttcaagtacagcccacaatgaccccacttcgtttagagctg
atagccgtcctgatgccaatattcctggggaaccaccctaactctggcattgttctccat
tatgcatggcatggccagggccagtccccgaccatccgtcagatcgtgatgcattccatg
gctgactggtacatgcgaggggacagcgaccagaccaggctctcgcgaatccttgacgta
gcccaggacctcaaagccctgtccctgctccttaacgccacaccattcctctttgttatc
gacctagcctgccttgcttcccggagagagtacctcaagctcgacaagtggatgacggat
aaaatcagagaacatggacaggagtcctttgtccagacctgtgtgaagttcctgaagagg
cgtgcccctcaggtgatgggagggatagccccggagcccagagagctaccaggaggtggg
aagacaggggtcttaccaccagaaaccataggaaccatgctagcctgtctacaggcttgt
gttagttctgtgtcaccggagcttgctgaaaccatcatgaacatggtagctaactgtgga
aacctgctcaagtctcgccccccaccgggtgtgatgaacaaccaggggatgcccccaatc
tcacctggaccagtcactccgattgactcgctaccaggcatgcctcctctaggctccacg
atgggcacctccattggatccaatatgggttcaaccatgggatctaatatgggttcagcc
attgggtctaatatgaattcagccatcgggtccaacatgggatcagccatcgggtccaat
atgaattcagccattggatccaacatgggctcagccatcgggtccaatatgaattcagcc
attggctccaacataggctctggcatggggtccaatatgaattcagccattgggtccaac
ataggctctggcatggggtccaatatgggttcagccatagggtccaacataggctctggc
atggggtccaacatgggttcagctatcgggtccaacatgggctcagccatcgggtccaac
atgaattctgccatcgggtccaacatgggctcagccattgggtctacaatgggctcaacg
atgggatcatcagcatcctctatgaccacacccaacctacaccccttcagctccaacccc
ctgggatccagcttcgggcaaccgccccagtcaccccagaaaacgttccccatgctgtct
gggcccggtcccaacctgggcggactcatcaatccaacacagtcgagcagtcatccaact
ggcaaaagtgatatatccaatatatggccagagttgaaccagtctttctctccagagatt
gatgaagaggccaacagctacttccagcagatctacaaccaaccgcccaaccccatcatg
tctgtggatgatgttcttcagatgcttaaacagttcaaggattcacaagtcacaagggaa
agggaggtgttcatgtgcatgctgaggaatctgtttgaagagtacaagttctttcctcag
tatccagagagagaactcttgatcactgcttgtctgtttggaggggtcattgagcaagga
ctagtcacatttatggctctgggaatggctctacgctatgttctagaagccctgagaaag
ccccacaacagcaagatgtacatgtttggcatagcagctctagacaagttcaagctacgt
ctcaaagactttgcccagtactgtacccatgttgcttccattcctcacttcaaacagttc
ccagagcatctcattgagtacgtgacttacggtcagcaatctatggaacctccagtcaca
agcagaccacaaccaacacccacaaccacaccggcaacagtaacaacgacagcatcatcc
atactgtcaacaacaaagcccacaccagcaactaccaccgtgtcagctatcaagccaatc
gccaaagcagctcctaagccttccattgctaataccaccaacatcgacaccctcctagtg
gccacaccctcggaggagattaaagaaccctcagaacaggtccaggacaagatattcttc
atcttcaacaacctctctcaggttaacctggtccaaaagtgtgaagaaatgaaggagctg
tgctcagaggaacacctggattggatatcccgctacctggtcctcaagagggctagcata
gagaccaacttccatacactctactccaactttgtagatcagatcaaactcaataagcta
gcagacatggtgctcaaagaaacctacaggaacattggggtgctgctagcatccagcaag
agtgattccaacttttcagataggacactcctaaagaaccttggacattggttaggcaaa
ctcacattagcaaagaaccatcccatcttacaagtggatcttgatatgaaagcccttatc
cttgaggcctaccacaagggccaggctgaactgctgtacgtggtgccctttgtagccaag
gtgatcgaatcctgcacgaagagccgcatcttcaagcctcccaacccctggaccatggct
atcttgaacgtcctgggcgagcttcaccaggagcccaacctcaaactcaatctcaaantt
gaagtagaggttctctgcaaggcattcaatgtcactatggacgacctgaagcctggcatg
tacctcaaggatctagagatggtcggtctcatcccccacaaattgacaacttccaagaag
ttcatggagggcggggccttcggtatctccgttggaatgggacaggacaacccatcttca
tcggtgggtggcttagcggctggcttagcaagtggcttagcggtacccctccctaccgtt
cccaacagttcactggtcggcgtcggcgagcaaggtattgcttcgtcagtgccgacaccc
cccactccgtctttgcctgcctcacaggcacccgttcctcagttcagcttccaagatctc
aacacctcagccctgacagggattgctcctctcactacagtcaacgcacagttggccatc
ttccaggcccaccctcagctgcgtaactgtgtgcgtccagccgtggagagagccgttcag
gagctggtgcaccctgtggttgaccgctccatcaagattgccctcagcacctgtgaacag
attgtcaagaaggactttgctcttgatcctgaggagaatcgtatgcgccttgccgcccat
cacatggtgcgtaacctgacagctggtatggctatgatcacatgccacgaaccactcatc
ttcagtatcatcaacaacttcaaactctcctgcatagcagccctcaagggtggtactcaa
cagcagaaggagctgatagaacaggccgcatctgtggttgccaacgacaatgtggaactg
gcttgttgcttcatccagaagtgtgctgtagagaaggccatccccgagatggaccggaga
ctcgccaccgagattgagctccggaagcacgcaaggaacgagaaccgtcgctactgtgat
ccggtcgtcctcacataccaggcagagaggatgccggaacagattagattaaaggttgga
ggagtgcctcagggtcagatagctgtctatgaggagtttgctcgcagcattccaggcttc
ctacccacaccagaagcaaaccaaccaccgggttttttagctaaacttacccagtcttac
gctgtcgacgagatcacccagatctacgacaagtgtattactgagatcgaccaacactta
cagttcatcagtcaggttatgcctcagtcccagcatatccagatcttacatgccctcctg
gagtctgtcatggtagccaggaactccagggagatcgtcacagcacttgcttgcctgcag
aaggctgttgaaggtcttctggaaggctacaccgtcagttcccttgaccccaatgcagcc
ttgcgctatagggatgcccacatcctagttctcaagtcactccaagatcagcgagcctat
ggtccacaatggacaaacaagcaggtcaccagagtcgtctgtgagacgagcagcgagagg
aaatacaaccttgatgccattgaacagctgttacgaacacaccttgtcaaccttcaaacc
attgacatgcatattgccacatccatggagaacggcctcaactatgcagccgtggggttc
gccatgagcgtcgtcaagcgattcctcattgatgagaagcagagcaatgtcttgaatgaa
gctgatctctacaacacactccatgtgctggctaggatcgccacacagagcccgaatcca
ccagagggtttgccccagttgattgagcttgtcaggcagaatcatgacccggcctttcta
gacaaggcacccggtggtcccacctctatgatgcactcgggcatctcccaggctcgtgag
tttgatgacccgccaggcctgagggagaagacagagtacctcctgagggagtgggtcaac
atgtactactcgccggctggaggcaaggacagcaccaaggccttctcagcatttgtcaat
cagatgcaccaacaaggcatcctgaagacggacgacctcatcactagattcttccgcctc
tctattgagctttgcgtggacgtgtgctaccgagccttggcagagcaggtacacagccag
gcactgacgcgagcaaagtgtttccagaccctggatgccttcgtaaggctcattgccctg
ctggtcaagcactccggagatgctaccaacccagtcaccaagatcaacctactcaacaag
gtattggggattgtagcaggagtactgcttcaggatcatgaggtacgccagacagagttt
catcagctagcctaccatcgtatcttcagtatgcttctcctggaactcaatgctccagag
cagatcctagaggcaatcaactttcaagtcatgtcagctttttgcaatgctcttcatgta
ctgagaccgtccaaggctccaggctttgtgtatgcctggctggaactgatctcacatcgt
atcttcattgctaggatgcttggcatgcttccacagcagaaggtaagactggagggatgg
ccaatgtatgcaggcctactgacaggtctcttcaagttcatgacaccattcatgcgcaac
gcagaacttccaaagcacctcgctctgctgtacaagggtactctgagagtgctgctggtg
cttcttcatgacttcccagagttcctgtgtgactaccactatggcttctgcgatgtgatc
ccaccaaactgcatccagatgcgcaacctgatcctgtctgccttccctcggaacatgagg
ctacctgacccgttcacgccgaacctcaaggttgacatgttagcagacattgcccaccat
cctcgcatcctgaccaactacgtcactgtcatccagcctgcatcgtttaagaaggatctc
gactcgtacatcaagacccgtagcccggtcacgttcctctctgagctgcgcagtcacatg
caggtgtcccaggagcctggccaacgctacaacgtctccctgatgaatgccctggtgctc
tacgtgggcatgcaggccatcaactacatccagagcaagggtagcacaccctctatgagt
accatcacgcactcttcccatatggacatctatcagaacctggtcgtggatctggataca
gaaggtcgctacttgttcttgaatgccattgccaatcagctgcggtaccctaacagccac
acccactacttcagctgtacactcctctacctctttgcagaggctaacacagaggctata
caggagcagatcactcgagtgctactggagcgtctgatcgtgaacagaccccacccatgg
ggacttctcatcacattcattgagctcatccgcaatcaccacttcaagttctggagtcat
gagtttgtgcactgcgctcctgaaatcaagaagctgtttgagtctgtggctcgtagctgt
atgcagcagaaaggcaccgcccagccaggcatggggagggataatgcagaagcacatgaa
acttaa
DBGET
integrated database retrieval system
