Semicossyphus pulcher (California sheephead): 138590045
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Entry
138590045 CDS
T10596
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138590045 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138590045 (dis3l)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
138590045 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
OB_HELZ2
Rrp44_S1
GFO_IDH_MocA_C3
Motif
Other DBs
NCBI-GeneID:
138590045
NCBI-ProteinID:
XP_069516680
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MIKTEKILHLKSCRGRKVRVVREHYLRETVPCYSSLCQADCENDGKVLPGDLTHYVVPDV
GVVVDFLEILEFRELQGIVFTQTACQAVQRKGRRQYNRLRHLLKDPRHDCVLFANEFQEY
SYCEREKGESQERWQTRCVYSAAVWYHNHLAGMIDVLMITDDQEAIAQYSSLNSGVYVIS
VQDFLQNFWPDLQAAHDLYSSISQALQEKEGESSQREFSEHLPAEVLEAGIKSGRYITGT
LNISKHRAQNEASIMTEALSNKNKDLSWGVLVFGVKNRNRAVHGDVVVVELLPKSEWRGK
VTALSEGQGEEKSGEETESQPMPTGRVVGILQRNWRDYVVTFPPRDGTQSQSRNSQRILA
VPWDHRIPKIRISTQQADALQDHRVVVRIDSWESTSLYPNGHSVRVLGRAGELETEVQTI
LIENCIHVPPFSDAQLRDMPVNSPEKPWTMDPAQVAERRDLRETHLVFSIDPQGCEDVDD
TLSIRSIAGGKLLELGVHIADVTHFVTEGSLTDLEARTRATTYYLADRRYDMLPAVLSAD
LCSLLGGVDRYAMSVLWELDAETLAVTKVWYGRTIIRSSFQLHYELAQALLNGEPAEVPE
LEKLTSEEKDAKLGQLMQALEMLTHVARHLRAQRDRGGALELEGVEVRAQLDEERNITAL
VPRQPLEVHETVAECMIYANHWVARKIQEAFPHQALLRCHPHPREEFFSQLVESATAGGF
TIDTRTNKALADSLDRAVDPQDPLVNRLLRMMATTAMSQALYFSTGLLAQDQFYHYGLAL
DRYTHFTSPIRRYADIVVHRLLTAAIAMDTGAEPGKTLSGHKELDEMALHINNKNRAAKR
AQKLSVELFQCLFFKERNPQTDLCCVANAAIYAIRDNGVLVFVPEYGVKAPVYLKNREGQ
VVSAGQDGSCEWQSGSVRRHSDHISTSCICGTSTFRLFEHITVRISVHTTNFHADSLHLE
IISNKPHSSAEPQQPRSQGRSQLVQAVVRLAEEASLQAQEREARGSKLSREEREYRQSKS
PNLYSLLEEVRELALMDLERTAQVCATTA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgataaagacggagaagattcttcatctgaagagctgccggggccggaaggtccgtgtg
gtccgggaacattatctgagagagacagttccgtgctacagctctctgtgtcaggcggac
tgtgagaacgatggaaaggtgcttccaggagacctgactcactacgtggttcctgatgtg
ggagtggtggttgactttctggagatcctggagttcagagagctgcaggggatcgtcttc
acgcagaccgcctgccaggctgtgcagcggaaaggacgcagacaatacaaccgcctgaga
cacctgcttaaagaccctcgacatgactgcgtgctgtttgcaaatgaatttcaggagtat
tcgtactgtgagcgagagaagggggagagccaggagaggtggcagaccaggtgtgtgtac
tctgcagcagtttggtaccataaccacctggcaggtatgatcgatgtcctgatgatcaca
gatgatcaggaagccatcgctcagtacagcagcctcaactctggagtgtacgtcatctcg
gtgcaggactttttgcagaacttctggccagacttgcaggcggctcatgatctgtacagc
tccatctctcaggcgctgcaggagaaggagggtgagagctcgcagagagagttcagcgaa
catctgcccgctgaggtcctggaggctggaatcaagtccggacgttacatcacgggcact
ctgaatatcagtaagcaccgtgcacagaatgaagcttccatcatgacggaggctttgtcc
aacaagaacaaagatctgagttggggcgtgttggtgttcggtgtgaagaatcgtaacaga
gccgttcacggggacgtggtcgtggtggagttgttaccaaagagcgagtggagagggaag
gtcacggccctgagtgaaggtcagggggaggagaagagcggagaggaaacggagagtcaa
cccatgccgacaggccgtgttgttgggatcctgcagaggaactggagggactatgtggtc
acgtttccccccagagacgggactcagtctcagagcaggaactcccagcgtatcctggct
gttccctgggaccaccgcatccccaagatccgcatcagtactcagcaggccgacgccctg
caggaccacagagtggtggtgcgcattgactcatgggaaagcacgtcgctctatccaaac
ggacacagtgtgcgggtgctgggtcgggccggagagctcgagacggaggtccagaccatc
ctcatagagaactgcatccacgtgcctcctttctcagacgcacagctcagagacatgccg
gtgaactctccggagaagccatggacgatggatccagcccaggtggccgagcggcgggac
ctcagggagactcacctggtgttcagcatcgacccgcagggctgtgaggacgtggacgac
acgttgtcgatacgcagcatcgccggagggaagctgctggagctcggcgtccacatcgct
gatgtcacacactttgtcaccgagggttcactcactgacctggaagcacggacgagagct
acgacctactacctggcagaccgcaggtacgacatgttgcctgctgtcctcagtgcagac
ctctgctctctgctgggaggagtcgaccggtatgcgatgagcgtgctgtgggagctcgat
gcggaaaccctcgctgtcactaaggtgtggtacggtcgcaccatcatccgctcttccttc
cagctccactacgagctggcccaggcgctcctcaacggagagccggctgaggtcccggag
ctggagaagctaacgtctgaggagaaggacgctaagctagggcagctcatgcaggctctg
gagatgctaacacatgtagcccggcacctgcgagcacagagggacagagggggcgctctg
gagctggagggggtggaggttcgagcccaactggacgaggagaggaacatcacggcactg
gtcccccgtcagcccctggaggtccacgaaacggtggccgagtgcatgatctatgccaac
cactgggtggcgcgtaagatccaggaagccttccctcatcaggccctgctcaggtgtcac
ccccacccacgggaggagttcttcagccagctggtggagagtgccacagccggggggttc
accatcgacaccaggactaacaaggctttagcggactctctggaccgggcggtggaccca
caggacccgctggtgaaccggctgctgagaatgatggccaccacagccatgtcccaggcg
ctgtatttctccactggtctgctggcccaagaccagttctaccattacggtttggctctg
gaccgttacacacacttcacctctccaatccgtcgctatgccgacatcgtggtgcaccgc
ctcctcactgcagccatcgccatggacacgggggcggagcctggtaaaacactgtccggt
cacaaagagctggatgaaatggctctgcacatcaacaacaagaacagggccgccaagcgg
gcccagaagctgtccgtcgagttgtttcagtgtctcttcttcaaagagagaaaccctcag
actgacctgtgctgcgtggccaacgctgccatctacgccatccgagacaacggcgtgctg
gtgtttgtcccagagtacggcgttaaagctccggtgtatctgaagaatcgggagggtcag
gtggtgtctgcaggacaggacggcagctgtgagtggcagagcggctccgtgagacgacac
tcggaccacatcagcacctcctgcatctgcggcacctccaccttcagactgttcgaacac
atcactgttcgtatttctgtccacaccacaaacttccacgcagacagcttacacctggag
atcatcagcaacaaaccccacagcagtgcggagccccagcagccccgctcgcagggccgc
agccagctggtgcaggcggtggtgcgtctggccgaggaggcgagcctgcaggcccaggag
agggaggcccgagggtccaaactgtccagagaggagagagagtaccgccaaagtaaaagc
cccaatctgtactctctgctggaggaggtcagggagctggctctgatggacctggagagg
actgcacaggtgtgtgcaactacagcgtag
DBGET
integrated database retrieval system
