Semicossyphus pulcher (California sheephead): 138595090
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Entry
138595090 CDS
T10596
Symbol
aptx
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03410
Base excision repair
Brite
Enzymes [BR:
spul01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
138595090 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
138595090 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
138595090 (aptx)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
138595090 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
138595090 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138595090
NCBI-ProteinID:
XP_069522509
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MPICWLISEDGNHKPIRLPHLQTVVLGRGPETTIKDKKCSRHQVELKAECNKGYVKVKQL
GLNPTSIDTVVVGKDNEVKMKPGQQLHIVNQLFPYTVQFKEDPTGDHGGSKRPREPSEER
ESHREAMSTKAAKHTEKVSVPLQQEQTAKSNESFGHWSQGLKTSMQDPKMQVYKDDKVVV
IKDKYPKARYHWLVLPWQSISSLKVLSEEHCDLLKHMQKVADQMVQQCPHASSLRFRTGY
HAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESHDVIQMLETNGRVAVKEGTS
ELLKLPLRCHVCRKELPTIPALKEHLKSHFAS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcctatttgctggcttatcagcgaggacggcaatcataaaccaattagactgccacat
ctacaaacagttgtgctgggtcgaggtccagaaacgactattaaagacaagaaatgctct
cggcatcaagttgaattgaaagcagagtgcaacaaaggttatgtcaaagttaaacagctg
ggcctgaaccctacctccatagacactgtggtggtgggtaaagacaatgaggtcaaaatg
aagcctggacagcagcttcacattgtcaatcagctcttcccgtacactgtgcagttcaag
gaggatcccactggggaccacggcggctccaaaagaccacgagagccatcagaggaaaga
gagagccacagagaggccatgagtacaaaagcagccaaacacactgaaaaggtgtctgtg
ccactccaacaagaacaaaccgcaaaaagcaatgaaagttttggacactggagccaaggc
cttaagacatcaatgcaagacccaaagatgcaggtgtacaaggatgataaagtagtagta
atcaaagataaataccccaaagctcgctaccactggctggtcctcccttggcagtccatt
tccagtctgaaggtcttaagtgaggagcattgtgacctgttgaaacacatgcagaaggtt
gccgatcaaatggttcagcagtgcccacatgctagctcactacgtttccgcacagggtat
catgccatcccaagtatgagccatgtgcacctccatgtgatcagccaagactttgactct
ccttgtttaaagaacaagaaacactggaactcattcacaactgactatttcattgagtca
catgatgtgattcaaatgcttgaaacaaatggaagggtcgctgtaaaagaaggaaccagt
gagctgttgaaactacctctccgctgtcacgtgtgtcgaaaagagcttcccactatccca
gcgctgaaggaacacctgaagtctcactttgccagctaa
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