Semicossyphus pulcher (California sheephead): 138610341
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Entry
138610341 CDS
T10596
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
spul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138610341 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
138610341 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138610341 (thoc5)
03041 Spliceosome [BR:
spul03041
]
138610341 (thoc5)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138610341 (thoc5)
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138610341 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
138610341
NCBI-ProteinID:
XP_069539181
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSSDALKKRKSKVLRSEGGTPEMKRGRGEGDQQDVRVYTEEVELDSRDPEQDYTQYKESC
ESLATLMSEIQDLKANGAKEGCAEVEQKRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEDEFHQEAPQEISRPHVT
RNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLTSLQPGLNAIMQA
SLPVQQYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLTVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLFFYYLMNLNIMTVKTKVSTSTDLNTAISAGDLLKSETLLSCLYTSDHGRETPNPAN
RYQFDKVGIVCFADYVDELGHPYMWVQTLGGLNFPKDSTEAVRVGSSLSASQMESTMKLL
RGRVQSRLALQKQFASLEHSIIPVSSECQHLFPAKIISRLARWNTITHEEYMDLLYTRHV
TDAGLAKETDMYFMGVVERGTARLQAAVVLSPRYPEVSPLFSLSLSWKRERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEGQDDGVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggacgcattaaagaagcgaaagtcgaaggttctccgtagtgaaggaggaacc
ccagagatgaagcgaggtcgcggagaaggggaccaacaggacgtgcgtgtgtataccgag
gaggtggagctggacagcagggaccctgagcaggactacacacagtataaagagtcatgt
gagagcctggccaccctcatgagtgagatacaggatcttaaagctaacggagccaaggag
gggtgtgctgaggtcgagcagaaacgaatgcagagctgtatccacttcatgaacctgaaa
aaactcaaccgtctcgctcacatgcgacttaagagaggcagagaccagacacacgaggca
aagcagaaagtggatgtgctgcaccttcagttacagaacctgctgtatgaagttatgcat
ctacagaaggagatcagcaagtgtctggagttcaagtctaagcacgaggaaatagaccta
gtgtccgaggatgagttccaccaggaggctccacaggagatttccaggcctcatgtcaca
agaaatgatccccatcagctcacactggcacgactggactgggagctggaacagaggaag
aggctggcagagaaatacaaggagtcacaggcgacaaaggagaagattcagaagagcatc
gaagtgaagaaggaacatctgacaagcttgcagccaggactcaatgccatcatgcaggcg
tctctccctgtgcagcagtatctgtccatgccttttgaacagactcagaaacagacagag
atcgcccgccacctgcctccacctctctatgtcctgtttgttcaagccaatgcttatggc
caggcctgtgacaagaacctgactgtctccatcagcggggatgtggatgaggctaaggcc
ctgtccaaacctccggaagattcccaggatgatgaaagcgactctgatgcagaggaggag
caagagaaaacgaagaggagaaggccgactacaggaggccagctggatgacaaaagacga
gagatgctgaaaaggcaccctctgtccctctgcttggacctcaagtgtaaagatggcagc
atccttcatctcttcttctactacctgatgaatctgaacattatgactgtcaagaccaag
gtctccacctccacagacctgaacacagccatcagcgcaggagatctgctgaaatcggag
actctactcagctgcctctacaccagcgaccacggacgagaaacacccaacccagctaac
cgctaccagtttgacaaagtcgggattgtttgctttgctgattatgtggatgagctggga
cacccctacatgtgggtgcagactctgggaggactcaattttcccaaagattctacagag
gctgtgcgtgtgggcagttccctgagtgccagccagatggagagcaccatgaagctgctg
aggggacgagtccagtcccgcctggctttacaaaaacagttcgcctctttagagcacagc
atcatccccgtctccagcgagtgtcagcacctctttcctgccaagatcatctcccgctta
gctcgctggaacaccatcactcatgaggagtacatggatctgctgtacacgcgtcatgtg
acggatgccgggctggcgaaggagactgatatgtacttcatgggtgtggtggaaagaggc
acagctcgtcttcaggccgctgtggtgctgagtccccgttacccagaagtctctcccctg
ttttccctctctctcagctggaagagagagcgcagtgggcgcactgacgacaaccttcga
gcaatggagagcgaggtcaatgtgttcaaaaatgagctgcagggaccacgtccaggacac
cagctcctgaccaatcagatctcccgcctgtgtgtctgcctggatgtgtatttggagact
gaaggacaagacgacggcgtggagggaccacgagagtttcccagagaaaagatgtgcctg
cgcactgtcaggggcccgaatcgtctgaagccgttcaagtacaaccatcctcagggcttc
ttcagtcaccgttaa
DBGET
integrated database retrieval system
