Sphingobium sp. WTD-1: N6H05_06240
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Entry
N6H05_06240 CDS
T10837
Symbol
pgeF
Name
(GenBank) peptidoglycan editing factor PgeF
KO
K05810
purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:
2.4.2.1
2.4.2.28
3.5.4.4
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00230
Purine metabolism
spwt00270
Cysteine and methionine metabolism
spwt01100
Metabolic pathways
spwt01232
Nucleotide metabolism
Module
spwt_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
N6H05_06240 (pgeF)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
N6H05_06240 (pgeF)
Enzymes [BR:
spwt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.1 purine-nucleoside phosphorylase
N6H05_06240 (pgeF)
2.4.2.28 S-methyl-5'-thioadenosine phosphorylase
N6H05_06240 (pgeF)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.4 adenosine deaminase
N6H05_06240 (pgeF)
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Motif
Pfam:
Cu-oxidase_4
Motif
Other DBs
NCBI-ProteinID:
WIA57388
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Position
complement(1260064..1260825)
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AA seq
253 aa
AA seq
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MIELLRAPALGDVPHGFAGRQGGVSTGVCAGLNVGLGSEDDRLAILRNRDLARDALLPGA
TLVTVRQVHSPDVVTVTAPIAEDERPEADAMVTRTPGLILGILTADCVPVLFADREAGVI
GAAHAGWKGAISGVTDRTIAAMEALGATREGIACAIGPCIGRTSYEVTLDFAERFERDDA
DNARFFSAGRAGHCQFDIAAYVASRLQAAGIGRISLLDEDTYSQANRFFSYRRSCHAQES
DYGRQISMIALPG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagttgctgcgggcgcccgcgctgggcgatgtcccgcatggctttgccggacga
caggggggcgtatcgacgggggtgtgcgccggtttgaatgtcgggctggggtctgaggac
gaccggctggcgatcctgcgcaaccgcgatctggcgcgcgacgcgctgctgcccggcgcg
acgctggtgacggtgcggcaggtccattcgcccgatgtggtgaccgtgaccgcgccgatc
gccgaggatgagcggcccgaggcggatgcgatggtgacccgcacgccggggcttattctg
ggcatattgaccgccgactgtgtgccggtgctgttcgccgacagggaagccggcgtgatc
ggcgcggcccatgccggctggaagggcgcgatcagcggcgtcaccgaccggacgatcgcg
gcgatggaagcgctgggcgcgacgcgcgaaggcatcgcctgcgccattggcccctgcata
gggcgtacttcctacgaggtgacgctggactttgccgagcggttcgagcgggacgacgcg
gacaatgcacgattcttcagcgccgggcgggcgggccactgccagttcgacattgccgcc
tatgtcgcgtcgcgcctgcaggcggcggggatcgggcggatcagcctgctggacgaggac
acctatagccaggccaatcgcttcttcagctatcgtcggtcctgccatgcgcaggaaagc
gattatggccggcagatatcgatgatcgccctgcccggctga
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