KEGG   Sphingobium sp. WTD-1: N6H05_13105
Entry
N6H05_13105       CDS       T10837                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
spwt  Sphingobium sp. WTD-1
Brite
KEGG Orthology (KO) [BR:spwt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spwt03009]
    N6H05_13105
Enzymes [BR:spwt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     N6H05_13105
Ribosome biogenesis [BR:spwt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    N6H05_13105
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: WIA54012
LinkDB
Position
complement(2628139..2629632)
AA seq 497 aa
MEPPKKSGPPRRSGPGGPKRPSGPGSRGGADRGTGRSDGRNEGRFDSRSEGRLDRSARRG
ERPARGPRLDRNGPGEARGNRFGEGRSERGEGRGARPDRSASGEGRGGRFAGNREEGRGD
RPARGARPDRNAAGEGRGRFGEARGERSERPARGRPERAAQPDRAERPARSGRPAEGKRP
ERATGDRPARAPFGERAARPAFGDRPARPRPEGRTEGRMGGTSYPPRRPGSKKPAAPHVA
NPHPARAAAETSGKGEPQRIAKLLARAGIASRREIERMIEEGRIARDGVTIDTPATLLTS
LHGVTVDGDPVAAPAPARLFLFHKPTGFLTTERDPAGRPTIYDILPDDLPRLMPIGRLDM
NTEGLLLLTTDGEFKREMELPSTGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIE
ANLERRTGRNQWIEMTLTEGKNREVRRVLEHFELKVNRLIRTSYGPFELGELAGGAVEEV
RQHDLVAFRSSLKKAQK
NT seq 1494 nt   +upstreamnt  +downstreamnt
gtggaaccgccaaaaaaatctggtccgccgcgccggtcaggtccgggcggtcccaagcgt
ccctccggccccggatcgcgtggcggcgccgaccgcggcacgggccgatccgacggtcgc
aacgaaggtcgttttgacagccggagcgaaggccggttggaccgctccgcccggcgtggc
gagcgccccgcgcgcggtccgcgtctcgatcgcaatggccccggcgaggcccgtggcaat
cgctttggcgaaggccgcagcgaacgtggcgaaggtcgcggcgcccgccctgatcgcagc
gcttcgggtgaaggccggggcggtcgttttgccggaaatcgcgaagaaggccgtggcgac
cgcccggcccgtggcgcgcgtcccgatcgcaacgccgccggcgaaggccgtggccgcttc
ggcgaagcgcgcggtgaacgcagcgaacgcccggcccgtggccgccccgagcgcgccgcc
cagccggatcgcgccgaacgccccgcccgcagcggtcgcccggccgaaggcaagcgcccc
gagcgcgccactggagatcgtcccgcccgcgcgccctttggcgagcgcgccgcccgcccc
gctttcggtgaccgcccggctcgcccgcgccccgaaggccgcactgaaggtcgtatgggc
ggcacatcctatccgccgcgccgccccggcagcaagaagccggctgccccccatgtcgcc
aacccgcacccggcccgtgccgccgcggaaaccagcggcaagggcgaaccccagcgcatc
gccaagctgctcgcccgcgccggcatcgcctcgcgccgcgagatcgagcggatgatcgag
gaaggccgtatcgccagggacggcgtcacgatcgacacccccgcgacgctgctgacctcg
ctccatggcgtgaccgtcgacggcgatccggtcgccgcgcccgcccccgcacgcctgttc
ctgttccacaagccgaccggcttcctcaccaccgagcgcgatcccgccggtcgcccgacc
atctacgacatcctgcccgacgacctgccgcggctgatgccgatcggccggctcgacatg
aataccgaggggctgttgctgctcaccaccgacggcgagttcaagcgcgagatggaattg
ccctcgaccggcgtgccgcgcacctatcgcgcccgcgcctttggcgaggtcagccaacag
cagttggaggatctgttcgacggcatcgagattgacggcatccaatatggtccgatcgag
gccaatctggaacgacgcaccggccgcaaccagtggatcgaaatgaccctgaccgagggc
aagaaccgcgaagtgcgccgcgtgctcgaacatttcgagctcaaggtcaatcgcctgatc
cgcaccagctacggcccgttcgagctgggtgaactggccggcggcgcggtcgaggaagtg
cgccagcatgacctggtcgccttccgcagcagcctgaagaaagcacagaaatga

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