Entry |
|
Name |
(GenBank) pseudouridine synthase
|
KO |
|
Organism |
spwt Sphingobium sp. WTD-1
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Brite |
KEGG Orthology (KO) [BR:spwt00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:spwt03009]
N6H05_13105
Enzymes [BR:spwt01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
N6H05_13105
Ribosome biogenesis [BR:spwt03009]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
N6H05_13105
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2628139..2629632)
|
AA seq |
497 aa
MEPPKKSGPPRRSGPGGPKRPSGPGSRGGADRGTGRSDGRNEGRFDSRSEGRLDRSARRG
ERPARGPRLDRNGPGEARGNRFGEGRSERGEGRGARPDRSASGEGRGGRFAGNREEGRGD
RPARGARPDRNAAGEGRGRFGEARGERSERPARGRPERAAQPDRAERPARSGRPAEGKRP
ERATGDRPARAPFGERAARPAFGDRPARPRPEGRTEGRMGGTSYPPRRPGSKKPAAPHVA
NPHPARAAAETSGKGEPQRIAKLLARAGIASRREIERMIEEGRIARDGVTIDTPATLLTS
LHGVTVDGDPVAAPAPARLFLFHKPTGFLTTERDPAGRPTIYDILPDDLPRLMPIGRLDM
NTEGLLLLTTDGEFKREMELPSTGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIE
ANLERRTGRNQWIEMTLTEGKNREVRRVLEHFELKVNRLIRTSYGPFELGELAGGAVEEV
RQHDLVAFRSSLKKAQK |
NT seq |
1494 nt +upstreamnt +downstreamnt
gtggaaccgccaaaaaaatctggtccgccgcgccggtcaggtccgggcggtcccaagcgt
ccctccggccccggatcgcgtggcggcgccgaccgcggcacgggccgatccgacggtcgc
aacgaaggtcgttttgacagccggagcgaaggccggttggaccgctccgcccggcgtggc
gagcgccccgcgcgcggtccgcgtctcgatcgcaatggccccggcgaggcccgtggcaat
cgctttggcgaaggccgcagcgaacgtggcgaaggtcgcggcgcccgccctgatcgcagc
gcttcgggtgaaggccggggcggtcgttttgccggaaatcgcgaagaaggccgtggcgac
cgcccggcccgtggcgcgcgtcccgatcgcaacgccgccggcgaaggccgtggccgcttc
ggcgaagcgcgcggtgaacgcagcgaacgcccggcccgtggccgccccgagcgcgccgcc
cagccggatcgcgccgaacgccccgcccgcagcggtcgcccggccgaaggcaagcgcccc
gagcgcgccactggagatcgtcccgcccgcgcgccctttggcgagcgcgccgcccgcccc
gctttcggtgaccgcccggctcgcccgcgccccgaaggccgcactgaaggtcgtatgggc
ggcacatcctatccgccgcgccgccccggcagcaagaagccggctgccccccatgtcgcc
aacccgcacccggcccgtgccgccgcggaaaccagcggcaagggcgaaccccagcgcatc
gccaagctgctcgcccgcgccggcatcgcctcgcgccgcgagatcgagcggatgatcgag
gaaggccgtatcgccagggacggcgtcacgatcgacacccccgcgacgctgctgacctcg
ctccatggcgtgaccgtcgacggcgatccggtcgccgcgcccgcccccgcacgcctgttc
ctgttccacaagccgaccggcttcctcaccaccgagcgcgatcccgccggtcgcccgacc
atctacgacatcctgcccgacgacctgccgcggctgatgccgatcggccggctcgacatg
aataccgaggggctgttgctgctcaccaccgacggcgagttcaagcgcgagatggaattg
ccctcgaccggcgtgccgcgcacctatcgcgcccgcgcctttggcgaggtcagccaacag
cagttggaggatctgttcgacggcatcgagattgacggcatccaatatggtccgatcgag
gccaatctggaacgacgcaccggccgcaaccagtggatcgaaatgaccctgaccgagggc
aagaaccgcgaagtgcgccgcgtgctcgaacatttcgagctcaaggtcaatcgcctgatc
cgcaccagctacggcccgttcgagctgggtgaactggccggcggcgcggtcgaggaagtg
cgccagcatgacctggtcgccttccgcagcagcctgaagaaagcacagaaatga |