KEGG   Sphingobium sp. WTD-1: N6H05_18575
Entry
N6H05_18575       CDS       T10837                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
spwt  Sphingobium sp. WTD-1
Pathway
spwt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spwt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    N6H05_18575 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spwt03400]
    N6H05_18575 (uvrA)
DNA repair and recombination proteins [BR:spwt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     N6H05_18575 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      N6H05_18575 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 nSTAND1 AAA_16 DnaJ_CXXCXGXG AAA_21 AAA_25
Other DBs
NCBI-ProteinID: WIA55023
LinkDB
Position
3769299..3772214
AA seq 971 aa
MSLTHISVRGAREHNLKGVDVDLPRDALIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIP
YSPATGEPISAQTVSQMVDRVMLLPEGTRFYLLAPVVRGRKGEYRKELAEWQKAGYTRVR
IDGELYLIEDAPALDKKYKHDIEVVVDRLAVNADMATRLADSFEQALKLADGLAFVDLAE
GVVPGREDEAQSAGKMKNAGIPANRIVFSEKFACPVSGFTIPEIEPRLFSFNAPMGACPA
CDGLGERQEFDPELVVPNEALSLKKGAVVPWAKSNPPSPYYMQVLGSLAKEFGFSLDTPW
AELPGEVKLIILHGTGGKPVTLRFVDGKKSYEVKKPFEGVIGNLNRRLLQTESAWMREEL
SKYQTAMPCETCHGARLKPEALAVKIAGEDISVSTRRSVVDALAFFTAMPDALNEQQNQI
ARAILKEIVERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEP
SIGLHQRDNDRLLVTLKRLRDLGNSVIVVEHDEDAIRAADYIVDMGPGAGVHGGTIVAQG
TLPELLAHKDSLTADYLNGTRRIEVPAKRRKGSGKKLTVHNARANNLTGVTASIPLGTFT
CITGVSGSGKSSFTIDTLYAASARTLNGARIVAGPHDKITGLEHCDKVIDIDQSPIGRTP
RSNPATYTGAFTNIRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLP
DVYVTCDVCHGARYNRETLEVKFKGMSIADVLDMTVEDAVEFFKAVPPIRDKMAMLAEVG
LGYIKVGQQATTLSGGEAQRVKLAKELSRRATGNTLYILDEPTTGLHFEDVRKLLEVLHA
LVEQGNSVVVIEHNLDVIKTADYIIDMGPEGGVKGGEVVAQGTPEQVVKEKRSFTGRYLA
PLLGLEAVAAE
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgagtctgacccatatttcggtgcgcggcgcgcgcgagcataatctcaagggcgtggac
gtcgatctgccccgcgacgccctgatcgtcatcaccggcctttccggctcgggcaagtcc
agcctcgccttcgacaccatctatgccgaggggcagcgccgctatgtggagtcgctctcc
gcctatgcgcgccagttcctggagatgatgcagaagcccgatgtcgagcatatcgagggc
ctctcccccgcgatcagcatcgagcagaagaccaccagccgcaacccgcgctccaccgtc
gcgaccgtcaccgagatttacgactatatgcgcctgctctgggcgcgcgtcggcatcccc
tattcgcccgccaccggcgagccgatcagcgcgcagaccgtcagccagatggtcgaccgg
gtcatgctcctgcccgaaggcacccgcttctacctgctcgccccggtcgtgcgcgggcgg
aagggcgaatatcgcaaggaactggccgagtggcagaaggcgggctacacccgcgtccgc
atcgacggcgagctttacctgatcgaggacgcccccgccctcgacaagaaatacaagcat
gacatcgaggtcgtggtcgatcgcctggcggtcaatgccgacatggccacccgcctcgcc
gacagtttcgagcaggcgctcaagctcgccgacggcctcgcctttgtcgacctggccgag
ggcgtcgtccccggccgcgaggacgaagcccagtccgcgggcaagatgaagaatgccggc
atccccgccaaccgcatcgtcttttccgagaaattcgcctgcccggtcagcggcttcacc
attcccgagatcgagccgcgcctcttctccttcaacgcccccatgggcgcctgcccggcc
tgcgacggcctgggcgagcggcaggagttcgaccccgaactggtcgtccccaacgaagcc
ctctccctgaagaagggcgccgtcgtcccctgggccaagtccaacccgcccagcccctat
tatatgcaggtcttgggctccctcgccaaggagttcggcttctccctcgacaccccctgg
gccgagctgccgggcgaggtgaagctcatcatcctccacggcaccggcggcaagcccgtc
accctgcgcttcgtcgacggcaagaagagctacgaggtcaagaagccgttcgagggcgtg
atcggcaacctcaaccgccgcctgctccagaccgaaagcgcctggatgcgcgaggaactg
agcaagtaccagaccgccatgccctgcgagacctgccacggcgcgcgcctcaagcccgaa
gcgctggcggtcaagatcgccggcgaggacatctccgtctccacccgccgctcggtggtg
gacgcgctcgccttcttcaccgcgatgcccgacgcgctcaatgagcagcagaaccagatc
gcccgcgccatcctcaaggaaattgtcgagcgcctcggcttcctcaacaatgtcggcctc
gattatctgaacctcgaccgcacatcaggcacattgtcgggcggcgaaagccagcgcatc
cgcctcgccagccagatcggctcgggcctctcgggcgtgctctacgtcctcgacgaaccc
tcgatcggcctgcaccagcgcgacaatgaccggctgctcgtcaccctgaaacgcctaaga
gacctcggcaacagcgtcatcgtcgtcgagcatgatgaggatgcgatccgcgccgccgac
tatattgtcgatatggggccgggcgccggcgtccatggcggcaccatcgtcgcccagggc
accctgcccgaactcttggcgcacaaggacagcctgaccgcggactatctcaacggcacc
cgccgcatcgaagtcccggccaagcgccgcaagggctcgggcaagaagctcaccgtccac
aatgcccgcgccaacaacctcaccggcgtcaccgcgtcgatcccgctcggcaccttcacc
tgcatcaccggcgtcagcggatcgggcaagtccagcttcaccatcgacaccctctacgcc
gccagcgcccgcaccctcaacggtgcccgcatcgtcgccggcccgcatgacaagatcacg
ggcctggaacattgcgacaaggtgatcgacatcgaccagtcgccgatcggccgcaccccg
cgctccaacccggccacctataccggcgccttcaccaatatccgcgactggttcgcgggc
ctccccgaagcgcaggcgcgcggctacaagccgggccgcttctccttcaacgtcaagggc
ggccgctgcgaagcctgccagggcgacggcgtgctcaagatcgagatgcacttcctcccc
gacgtctatgtcacatgcgacgtctgccacggcgcccgctacaatcgcgagacgctggag
gtgaagttcaaggggatgagcatcgccgacgtgctcgacatgacggtcgaggatgcggtc
gaattcttcaaggccgtgccgccgatccgcgacaagatggcgatgctcgccgaagtgggc
cttggctatatcaaggtcggccagcaggccaccaccctgtcgggcggcgaagcccagcgc
gtcaagctcgccaaggaattgtcgcgccgcgccaccggcaacaccctctatatcctcgac
gaacccaccaccggcctgcatttcgaagatgtccgcaagctgctggaagtcctccacgcc
ctagtcgaacagggcaacagcgtcgtggtgatcgagcataatctcgatgttatcaagacg
gcggattatatcatcgacatgggaccggaaggcggcgtgaaaggcggcgaagtcgtcgcg
cagggcacgccggagcaggtggtgaaggagaagcgcagctttaccgggcgctatctggcg
ccgttgctggggctggaggctgtggcggcggagtaa

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