Sphingobium sp. WTD-1: N6H05_21085
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Entry
N6H05_21085 CDS
T10837
Symbol
galB
Name
(GenBank) beta-galactosidase GalB
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00052
Galactose metabolism
spwt00511
Other glycan degradation
spwt00600
Sphingolipid metabolism
spwt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
N6H05_21085 (galB)
09103 Lipid metabolism
00600 Sphingolipid metabolism
N6H05_21085 (galB)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
N6H05_21085 (galB)
Enzymes [BR:
spwt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
N6H05_21085 (galB)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N2
BetaGal_gal-bd
Glyco_hydro_2_N
Invasin_D3
TcaA_3rd_4th
BetaGal_ABD2
Big_1
Motif
Other DBs
NCBI-ProteinID:
WIA55498
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All DBs
Position
complement(4234665..4237346)
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AA seq
893 aa
AA seq
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MKTLRTILLASCLLSPATLLAAPRDSVSISRDWRFTKGDPAGLSEDLRYDVRPPIEDAGD
GKVADARPDAAVQVDDSGARVLKPWILPSANPFIADPARHHTRPAGNPGGTVAYVQPGFD
DSGWTHVDLPHDWAIAGPFIKDGPYGGMGRLPSWGIGWYRKALTIPASDKGKSIFLDVEG
AMSYATVWLNGKLVGGWPYGYNSFRLDLTPYAVPGGQNQLVIRLDNPQASARWYPGGGLY
RDIYLTTTNKVHVGQWGSIVRTPQVSKAQASVDLSLTLDNDGDTPAQVEVATAFYAIDAS
GKRIGRPVASIARQSTSIAAHGKAELKGSTILSNPRLWGPPPTQAPNRYVAVSTVTQGGK
LIDSYETRFGVRDIKFDPDKGVIVNGEQIPLRGVNNHHDLGALGAAFNARAAERQLEILR
DMGTNAVRMSHNPPAPELLELTDRMGFLVMDEVFDSWEKKKTPHDFHLIFPDWHEADARA
MLRRDRNHPSIIIWSIGNEVGEQYDGEAGAKIGRELVAIAHQEDPTRPATSAMNYAKADM
LLPTTVDVISLNYQGAGIRGIVGQYPAFRAKFPDKVILSTESASALSSRGEYMFPVAGAI
SGPVRPWSGGNPDTHQVSAYEMHAADFGSSPDRVWAADDQNPYVAGEFVWTGFDYLGEPT
PYYTSRSSYSGILDLAGFPKDRFWLYQARWRPDLKFAHILPHWTWPDRVGQITPVHVFSS
ADEAELFVNGKSQGKVKKRDYEYRFRWDYVVYEPGEVKVVTWKKGQPWATETIRTVGEAA
KLSLTADRSAIVDDGRDLSFVTLKILDKDGNVVPAAKQDIRFSIEGPGEIIATDNGDPTD
LTAFPSHDRKAFNGLALVIVKAKPGEKGRVTVRASAPGLTAAQAVISTNATVR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccctgcgcaccatcctgctcgcctcctgcctgctcagccccgcgaccttgctg
gccgcgccgcgcgacagcgtctcgatcagccgcgactggcgcttcaccaagggcgatccc
gccggcctgagcgaggatttgcgctatgatgtccgtccgccgatcgaggatgccggcgac
ggcaaggtggctgacgcccgccccgacgcggcggtgcaggtggacgatagcggcgcccgc
gtgctcaagccctggatattgcccagcgccaatcccttcatcgccgatcccgccaggcat
cacacccgccccgccggcaatcctggcggcaccgtcgcctatgtccagcccggcttcgac
gacagcggctggacccatgtcgacctgccgcacgactgggccatcgccggccccttcatc
aaggatggcccctatggcggcatgggccgcctgcccagctggggcatcggctggtatcgc
aaggcgctgaccatccccgccagcgacaagggcaagtcgatcttcctcgatgtcgagggg
gcgatgtcctacgccaccgtctggctgaatggaaagctcgtcggcggttggccctatggc
tataacagcttccgcctcgacctcaccccctatgcggtgccgggcgggcagaaccagctg
gtgatccgcctcgacaatccccaggcttcggcgcgctggtatccgggcggcggcctctat
cgcgacatctatctcaccaccaccaacaaggtccatgtcggccagtggggcagcatcgtc
cgcacgccgcaggtcagcaaggcgcaggccagcgtggacctgagcctcaccctcgacaat
gacggcgacaccccggcgcaggtcgaggtcgcgaccgctttctatgcgatcgacgccagc
ggcaagcgcatcggccgccccgtcgccagcatcgcccgccagtcgaccagcatcgccgcc
catggcaaggcggagctgaagggcagcacgatcctcagcaacccgcgcctctggggtccg
ccgcccacgcaggcgcccaaccgctatgtcgccgtctccaccgtgacccagggcggcaag
ctgatcgacagctacgagacccgcttcggcgtacgcgacatcaagttcgatcccgacaag
ggcgtgatcgtcaatggcgagcagatcccgctgcgcggcgtcaacaatcatcatgacctt
ggcgcactcggtgccgccttcaacgcccgcgcagccgagcgccagctcgaaatattgcgc
gacatgggcaccaacgccgtgcgcatgagccataatccgcccgcgcccgaactgctcgaa
cttaccgaccgcatgggcttcctggtgatggacgaggtgttcgacagctgggagaagaag
aagaccccgcatgacttccacctgatcttccccgactggcatgaggccgacgcgcgcgcc
atgctgcgccgcgaccgcaaccatccctcgatcatcatctggagcatcggcaacgaggtc
ggcgaacaatatgatggcgaggcgggcgcaaagatcggccgcgaactggtcgccatcgcg
catcaggaagacccgacccgtcccgccaccagcgcgatgaactatgccaaggcggacatg
ctgctgccgaccaccgtggacgtcatcagcctcaattatcagggcgccggcattcgcggc
atcgtcggccaatatcccgccttccgcgcgaaattcccggacaaggtcatattgtccacc
gaaagcgcctcggccctttccagccgcggcgaatatatgttcccggtcgccggcgcgatc
agcggtccggtccgcccctggtcgggcggcaatcccgacacgcatcaggtctccgcctat
gagatgcacgccgccgatttcggctcctcgcccgaccgggtctgggctgccgatgaccag
aacccctatgtcgcgggcgagttcgtctggaccggcttcgattatctcggcgaaccgacc
ccctattacacgtcgcgcagcagctattccggcatcctcgatctcgccggtttccccaag
gaccgcttctggctctaccaggcgcgctggcggccggacctcaaattcgcgcatatcctg
ccgcactggacctggcccgaccgcgtcggccagatcaccccggtccatgtcttctcctcg
gccgacgaggcggaactgttcgtcaacggcaagtcgcagggcaaggtcaagaagcgcgat
tatgaatatcgcttccgctgggactatgtcgtctatgaaccgggcgaggtgaaggtcgtc
acctggaagaagggccagccctgggcgaccgagacgatccgcaccgtgggcgaggcggca
aagctgtcgctgaccgccgatcgcagcgccatcgtcgatgacggccgtgatttgagcttc
gtgacgctcaagatactcgacaaggacggcaatgtcgttcccgccgccaagcaggacatc
cgcttctcgatcgagggaccgggcgagatcattgccaccgacaatggcgacccgaccgat
ctgaccgcctttccgtcgcatgatcgcaaggctttcaatggcctggcgctggtgatcgtg
aaggccaagccgggcgagaaggggcgggtaaccgtccgcgccagcgcaccgggcctgacc
gcggcgcaggccgtcatcagcacaaatgccacagtccgctga
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