Sphingobium sp. YG1: YGS_C1P1557
Help
Entry
YGS_C1P1557 CDS
T05858
Name
(GenBank) farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00900
Terpenoid backbone biosynthesis
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
YGS_C1P1557
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
spyg01006
]
YGS_C1P1557
Enzymes [BR:
spyg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
YGS_C1P1557
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
YGS_C1P1557
Prenyltransferases [BR:
spyg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
YGS_C1P1557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BBD00302
LinkDB
All DBs
Position
1:complement(1682901..1683818)
Genome browser
AA seq
305 aa
AA seq
DB search
MTGGGESASATALVTARAGEVAQAIDAAFDRLLPLPQDARVRLYDAMRHAAIGGGKRLRP
LLVQATSDLFNISRDSALRVGLAVECIHVYSLIHDDLPAMDDDDMRRGKPTVHKAFDEAT
AILAGDCLHDLAFEILADEETHPDPFVRIELVRALAAASGPAGMAGGQMMDLEAEKTRFD
LATVTRLQNLKTGALIAFCVEAAAIMARLPHEARTGLHGYARDIGLAFQIADDLLDVEGD
AALAGKALGKDAAAGKETFLSLMGVERAREQAHMLVAQAKAHLHGHGPEADLLRAIADYI
VERDR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacggggggaggagagagcgcctccgcaacggcgctggtcacggcgcgggcgggcgag
gtcgcgcaggcgatcgacgccgcgttcgaccggttgctgcccttgccgcaggatgcgcgc
gtccgcctctatgatgcgatgcggcatgccgcgatcggtggcggcaagcggctgcgcccg
ctgctggtgcaggcgaccagcgatctgttcaacatttcccgcgactcggcgctgcgcgtt
gggctggcggtcgaatgcatccatgtctattcgctgatccacgacgatctgccggcgatg
gacgatgacgatatgcggcgcggcaagccgaccgtccacaaggcgttcgacgaggcgacg
gcgatcctggcgggcgattgcctgcacgatctggcgttcgagatattggccgacgaggag
acgcatcccgatccgttcgtgcggatcgaactggtgcgcgcgctggccgccgccagtggc
ccggctggcatggcgggcgggcagatgatggatctggaagcggaaaagacccgcttcgac
ctggccaccgtcacgcggctccagaatttgaagaccggggcgctgatcgctttctgtgtc
gaggcggccgcgatcatggcgcgtttgccgcatgaggcgcgcacgggcctgcacggctat
gcccgcgacatcggcctggccttccagattgccgacgacctgctggacgtagagggcgac
gcggcgctggcgggcaaggcgttgggcaaggatgccgcggcgggcaaggaaaccttcctg
tcgctgatgggcgtggaacgggcgcgcgagcaggcgcatatgctggtggcgcaggccaag
gcgcatctgcatggccatggtcccgaagcggacctgctgcgcgccattgccgactatatc
gtggagagggatcgctaa
DBGET
integrated database retrieval system