Sphingobium sp. YG1: YGS_C1P1617
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Entry
YGS_C1P1617 CDS
T05858
Name
(GenBank) succinyl-CoA synthetase beta subunit
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00020
Citrate cycle (TCA cycle)
spyg00640
Propanoate metabolism
spyg00660
C5-Branched dibasic acid metabolism
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
spyg01120
Microbial metabolism in diverse environments
spyg01200
Carbon metabolism
Module
spyg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spyg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YGS_C1P1617
00640 Propanoate metabolism
YGS_C1P1617
00660 C5-Branched dibasic acid metabolism
YGS_C1P1617
Enzymes [BR:
spyg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
YGS_C1P1617
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
BBD00362
UniProt:
A0A2Z6AEH4
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Position
1:complement(1738741..1739940)
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AA seq
399 aa
AA seq
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MNIHEYQAKELLAKYGAPIAAGYAAFTVEEAVEAAKKLPGPLYVVKSQIHAGGRGKGKFK
ELAPEAKGGVRLAFNLDEVKAHSADMLGNTLVTIQTGDAGKQVNRLYITDGADIAKEFYL
ALLVDRATSRIAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPAAGFQPHHGRAIANALGLT
GDLAKQASKVASSLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIA
ELRDLTEEDAAEVEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVG
GGATTEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIANGIVAAAKEVNLSVPLVVRLE
GTNVQQGKDILANSGLPIVPADDLGDAAKKIVAEVRKAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcacgaatatcaggccaaggaactgctggcgaagtatggcgcgccgatcgcc
gccggctatgccgccttcacggtcgaagaagccgtcgaagctgccaagaagctgcctggg
ccgctttatgtcgtgaagtcgcagatccacgctggtggccgcggcaagggcaagttcaag
gaactggcccccgaagccaagggcggcgtgcgccttgccttcaatctagacgaagtgaag
gcccattcggccgacatgctcggcaacacgctggtcaccatccagaccggcgacgccggc
aagcaggtcaaccgtctgtacatcaccgacggtgccgacatcgccaaggaattctacctg
gcgctgttggtcgatcgcgccaccagccgcatcgctttcgttgtgtcgaccgaaggcggc
atggacattgaagaggtcgcgcattcgaccccggaaaagatccacagcttctcggtcgat
ccggctgctggcttccagccgcaccatggccgcgccatcgccaacgctctgggcctgacc
ggtgacctcgccaagcaggcgtcgaaggttgcttcgtcgctctatgccgcgttcctcgac
accgatgccgagcagatcgaagtcaacccgttggcgctgaccgagcagggcaacctgctg
gttctggacgccaaggtcggttttgacggtaacgccatgttccgtcacaaggacatcgcc
gaactgcgcgacctgaccgaagaagatgcggccgaagtcgaagcgtcgaagtacgacctc
gcctacatcaagctggacggcaacatcggttgcatggtcaacggcgctggcctggccatg
gcgacgatggatatcatcaagctgaacggcgaattccccgccaacttcctggacgtaggt
ggcggcgccaccaccgaaaaggtgacggctgccttcaagatcatcctgaaggatccggcg
gtgaagggcatcctggtcaacatcttcggcggcatcatgaagtgcgacatcattgccaat
ggcatcgtcgccgccgccaaggaagtgaatttgtcggttccgctggtcgtccgtctggaa
ggcaccaacgtccagcagggcaaggacattttggccaattccggtcttccgatcgtcccg
gcggacgatctgggcgacgcggccaagaagatcgtggcggaagtgaggaaggcggcctga
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