Sphingobium sp. YG1: YGS_C1P2850
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Entry
YGS_C1P2850 CDS
T05858
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg03030
DNA replication
spyg03430
Mismatch repair
spyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YGS_C1P2850
03430 Mismatch repair
YGS_C1P2850
03440 Homologous recombination
YGS_C1P2850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyg03032
]
YGS_C1P2850
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C1P2850
Enzymes [BR:
spyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YGS_C1P2850
DNA replication proteins [BR:
spyg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YGS_C1P2850
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YGS_C1P2850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BBD01595
UniProt:
A0A2Z6AJ06
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All DBs
Position
1:complement(3048552..3049664)
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AA seq
370 aa
AA seq
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MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASADGAIKLMATDLDLQIVESVSA
QVEQAGATTISAHTLFDIARKLPEGSQVSLHAAEGKMLIQAGRARFNLSTLPRDDFPVIA
EGDLPTTFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVTDDDQPVLKAAATDGHRL
ARVTVTRPDGAEGMPGIIIPRKCIGELRKLLDEVEGSVGIALSASKIRFGLGSAILTSKL
IDGTFPDYSRVIPTANDKLLKIDPRSFEDGVDRVATIATEKTRAVKMSLDKDKITLSVTS
PENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDSDLVELHLADAAAPTLIRESDDSP
ALYVLMPMRV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaccatcgaacgcgcaacgctcctcaagagcctgagccacgtccaatcggtg
gtcgagcgcagaaataccattcccatcctgtccaacgtcctgatcgaggcatcggccgac
ggcgcgatcaagctgatggcgaccgaccttgacctgcagatcgtcgaaagcgtgtcggcg
caggtggaacaggccggcgccaccaccatttccgcgcacacattgttcgacatcgcccgc
aagctgcccgagggcagccaggtgtcgctgcatgcggccgagggcaagatgctgatccag
gccggtcgcgcccgcttcaacctgtcgaccctgccgcgcgacgatttcccggtgatcgcc
gagggcgacctgcccacgacgttcgaactgccagccgaaacgttgaagcagatcatcgac
aagacgcgcttcgccatttcgaccgaagagacgcgctattatctgaacggcatctatttc
cacgtcacagacgacgatcagccggtgctgaaggccgctgcgaccgacggccaccgtctg
gcgcgcgtcaccgtgacccgcccggacggcgcggaaggcatgcccggcatcatcatcccg
cgcaaatgtatcggcgaactgcgcaagctgctggacgaggtcgaagggtcggtgggcatc
gccctgtcggccagcaagatccgctttggcctgggcagcgcgatcctgaccagcaagctg
atcgacggtaccttccccgattatagccgcgtcatcccgaccgcgaacgacaagctgctc
aagatcgatccgcgcagcttcgaggatggcgtcgaccgcgtcgccaccatcgccacggaa
aagacccgcgcggtcaagatgagcctggacaaggacaagatcaccctgtccgtcaccagc
cccgaaaatggcaccgcggccgaagaagtgcccggcgcgttccagggcgaaggtttcgat
atcggcttcaatgcccgctatctgctcgacatattgggccagatcgacagcgatttggtc
gagctgcatctggcggatgccgccgcgccgacgctgatccgtgaaagcgacgacagcccg
gcgctctacgtgctgatgccgatgcgcgtctga
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