Stakelama tenebrarum: G5C33_08150
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Entry
G5C33_08150 CDS
T06464
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spzr
Stakelama tenebrarum
Pathway
spzr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G5C33_08150 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spzr03021
]
G5C33_08150 (rpoB)
03400 DNA repair and recombination proteins [BR:
spzr03400
]
G5C33_08150 (rpoB)
Enzymes [BR:
spzr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G5C33_08150 (rpoB)
Transcription machinery [BR:
spzr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G5C33_08150 (rpoB)
DNA repair and recombination proteins [BR:
spzr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G5C33_08150 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
B
Motif
Other DBs
NCBI-ProteinID:
QIG79764
UniProt:
A0A6G6Y492
LinkDB
All DBs
Position
complement(1664283..1668461)
Genome browser
AA seq
1392 aa
AA seq
DB search
MASKAIENGAALRAGQNSSVKRRIRKIFGDIHEVVEMPNLIEVQRESYEQFLRSDPSIGY
VSGLEKTLRSVFPIRDFAGTAELDFVNYELEPPKFDTDECRQRGITYAAPMRVTLRLIVF
EVDPDTEARSVLDIKEQDVYMGDMPLMTENGTFFINGTERVIVSQMHRSPGVLFDHDRGK
THASGKYLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTSLLYALGLNSEEILNY
FYNTVTYVRGEGGWQIPFTPENWRGVKPTFDIVDAKSGEVVFAAGQKISPRAANKAGREG
LETLLIPTEEIFGRYSAYDLINEKTGEIYIEAGDEVSPENLEKLDKAGLDRVELLDIDHV
TTGPWIRNTLKVDKAEDREQALADIYRVMRPGEPPTLETAEALFGGLFFDPERYDLSAVG
RVKLNMRLDLDAEDTVTTLRTEDILAVVKTLVGLKDGKGEVDDIDNLGNRRVRSVGELLE
NQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPL
SEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFSRV
NKYGFIETPYRKIIDGKVTNEVVYLSAMEEQKHTVAQASADLNEDGSFADDLVSARQGGE
FLMALRDQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPFVG
TGMEETVARDSGAAIAAKRSGIVDQVDATRIVIRASGDVEATESGVDIYTLMKFQRSNQS
TCINQRPLVKVGETVNAGDIIADGPSTEFGELALGRNALVAFMPWNGYNYEDSILISERI
VKDDVFTSIHIDEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVEPGDI
LVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGIDKD
ERALAIEREEIERLRKDSDDERNILNRATWSRLKEMLLGQVATGAPKGVKKGTEISEDVL
DSVDRHEWWKFAVQDDAMQSNLEAVKAQYDEAVKKIRDKFEDRREKLERGDELPPGVLKM
VKVFVAVKRKLQPGDKMAGRHGNKGVISRILPQEDMPFLEDGTPVDIVLNPLGVPSRMNV
GQIFETHLGWAARNLGMQVTRQLEDWREANPDAQPGEIPDAVKDRLKTVYGEHYADGIDA
RKPEQVAELIQNVSTGVPMGTPVFDGARESDVADMLELAGLDRSGQSTLFDGRTGDAFDR
KVTVGIIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGA
AYTLQEMLTVKSDDVIGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELKSHE
DEDQDELPEAAE
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaggcgatcgaaaacggcgcggcgctccgcgcgggccagaacagcagcgtc
aagcgccgcatccgcaagatcttcggcgacatccacgaagtcgtcgaaatgccgaacctg
atcgaggttcagcgcgaatcctacgagcagttcctgcggtccgatccctcgatcggctat
gtctcgggcctggaaaagacgctgcgcagcgtcttcccgatccgcgatttcgccggcacc
gccgagctcgacttcgtcaattacgaactcgaaccgccgaagttcgacaccgacgaatgc
cgccagcgcggcatcacctatgccgcgccgatgcgcgtcacgctgcgcctgatcgtgttc
gaagtcgatcccgataccgaagcccgttcggttctcgatatcaaggagcaggacgtctac
atgggcgacatgccgctcatgaccgagaacggcaccttcttcatcaacggcaccgaacgc
gtcatcgtgtcgcagatgcaccgctcgccgggtgtgctgttcgaccatgaccgcggcaag
acgcacgcttcgggcaagtatctcttcgccgcgcgcgtgatcccctatcgcggttcgtgg
ctcgatttcgagttcgacgccaaggacatcgtcaatgtccgcatcgaccgcaagcgcaag
ctgccggtcacctcgctgctctatgcgctcggcctgaacagcgaggaaatcctcaactat
ttctacaacaccgtcacttatgtgcgcggtgaaggcggctggcagatcccgttcacgccg
gaaaactggcgcggtgtgaagccgaccttcgacatcgtcgacgccaagtcgggcgaagtc
gtgttcgccgccggccagaagatcagcccgcgcgccgccaacaaggcgggccgcgagggc
ctggaaacgctgctgattccgaccgaggaaatcttcggccgctacagcgcctatgacctg
atcaacgagaagaccggcgagatctacatcgaggccggcgacgaagtgtcgcccgaaaac
ctcgaaaagctcgacaaggccgggctcgaccgcgtcgagctgctcgacatcgatcacgtc
accaccggcccctggatccgcaacacgctcaaggtcgacaaggccgaggatcgcgaacag
gcgctggccgacatctatcgcgtcatgcgccccggcgaaccgccgacgctcgaaaccgcc
gaagcgctgttcggcggtctgttcttcgatcccgagcgctatgacctctcggccgtcggc
cgtgtgaagctcaacatgcgcctcgatctcgatgccgaggacaccgtcacgacgctgcgc
accgaggacatcctcgcagtggtcaagacgctggtcggcctgaaggacggcaagggcgaa
gtcgacgatatcgacaatctcggcaaccgccgcgtgcgttcggtgggcgagctgctcgaa
aaccagtatcgcgtcggcctgctgcgcatggaacgcgcggtgaaggaacgcatgtcgtcg
gtcgacgtgtcgacggtgatgccgaacgacctgatcaacgccaagccggcggttgccgcg
gtgcgcgaattcttcggctcctcgcagctgtcgcagttcatggaccagaccaacccgctg
tccgaagtgacgcacaagcgtcgcgtttcggcgctcgggccgggcggcctgacgcgcgaa
cgcgccggcttcgaagtccgcgacgttcatccgacgcattatggccgtatctgcccgatc
gaaacgccggaaggcccgaacatcggtctgatcaacagcctcgcgacgttcagccgcgtg
aacaagtacggcttcatcgaaaccccgtaccgcaagatcatcgacggcaaggtcacgaac
gaagtcgtctatctctcggcgatggaagagcagaagcacaccgtcgcgcaggcatcggcc
gacctcaacgaggacggcagcttcgctgacgatctggtgtcggcgcgtcagggcggcgaa
ttcctgatggcgctgcgcgatcagatcacgctgatggacgtttcgcccaagcagctcgtc
tcggtcgcggcctcgctcattccgttcctggaaaacgatgacgccaaccgcgcgctgatg
ggatcgaacatgcagcgccaggccgtgccgctggtgaaggccgaagcgcctttcgtcggc
accggcatggaagaaacggttgcgcgggattcgggcgcggcgatcgccgccaagcgttcg
ggcatcgtcgatcaggtggacgccacccgtatcgtcatccgcgcctcgggcgatgtcgaa
gccaccgaaagcggcgtcgacatctacacgctgatgaagttccagcgttcgaaccagtcg
acctgcatcaaccagcgtccgctggtgaaggttggcgagacggtgaacgccggtgacatc
atcgccgacggcccctcgaccgagttcggcgagctggcgctgggccgcaacgcgctcgtc
gcgttcatgccctggaacggctacaactacgaggactcgatcctgatctccgagcgcatc
gtgaaggacgacgtgttcacgtcgatccacatcgatgaattcgaagtgatggcgcgcgac
accaagctcgggcccgaagacatcacccgcgacattcccaatgtcggcgaggaagcgctg
cgcaacctcgacgaagcgggcatcgtctatatcggcgccgaagtggagccgggcgacatc
ctggtcggcaagatcacgcccaagggcgaaagcccgatgacgccggaggaaaagctcctc
cgcgccatcttcggcgaaaaggccagcgacgtgcgcgacacctcgctccgcctgccgccg
ggcgttgccggcacgatcgtcgacgtccgcgtcttcaatcgccacggcatcgacaaggac
gagcgcgcgctggcgatcgaacgcgaggaaatcgagcgtctgcgcaaggactcggacgac
gaacgcaacatcctcaaccgcgccacctggtcgcgtctgaaggaaatgctgctcggccag
gtcgccaccggcgcgcccaagggcgtcaagaagggcaccgagatctccgaggacgtgctc
gacagcgtcgatcgtcacgaatggtggaagttcgccgttcaggacgacgcgatgcagtcg
aacctcgaagcggtgaaggcccagtatgacgaggcggtgaagaagatccgcgacaagttc
gaggatcgccgcgagaagctggagcggggcgacgagctgccgccgggcgtgctcaagatg
gtcaaggtgttcgtcgcggtgaagcgcaagctgcagccgggcgacaagatggccggccgc
cacgggaacaagggtgtcatctcgcggatcctgccgcaggaagacatgcccttcctcgag
gacggtacgccggtcgacatcgtgctcaacccgctgggcgtgccttcgcgcatgaacgtc
gggcagatcttcgagacgcatctcggctgggcggcccgcaatctgggcatgcaggtcacg
cggcaactggaagactggcgcgaagccaatcccgatgcgcagccgggcgaaatccccgat
gcggtcaaggaccggctcaagaccgtctatggcgaacattatgccgacggcatcgatgcg
cggaagcccgagcaggtcgccgagctgatccagaatgtcagcacgggcgtcccgatgggc
acgccggtgttcgacggcgcgcgcgaaagcgacgtggcggacatgctggagctggcgggt
ctcgatcgttcgggccagtcgaccttgttcgacggccgcaccggcgacgcgttcgaccgc
aaggtgacggtgggcatcatctacatgctcaagctgcaccacctggtcgacgacaagatc
cacgcgcgttcgatcggcccctactcgctcgtcacccagcagccgctgggcggcaaggcg
cagttcggcggccagcgcttcggggaaatggaagtgtgggcgctccaggcttatggcgcc
gcctacacgctccaggaaatgctgacggtgaagtccgacgacgtgatcggccgcaccaag
gtctatgaagcgatcgtcaagggcgacgataccttcgaggccggcatccccgagagcttc
aacgtgctcgtcaaggaaatgcgctcgctgggcctcaacgtggaactcaagagccacgag
gacgaggaccaggacgagctgcccgaggctgcggaatag
DBGET
integrated database retrieval system
