Sphingosinithalassobacter tenebrarum: G5C33_12925
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Entry
G5C33_12925 CDS
T06464
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spzr
Sphingosinithalassobacter tenebrarum
Pathway
spzr03420
Nucleotide excision repair
spzr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5C33_12925
03430 Mismatch repair
G5C33_12925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spzr03400
]
G5C33_12925
Enzymes [BR:
spzr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5C33_12925
DNA repair and recombination proteins [BR:
spzr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5C33_12925
MMR (mismatch excision repair)
Other MMR factors
G5C33_12925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
AAA_12
Terminase_6N
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QIG80595
UniProt:
A0A6G6Y6P5
LinkDB
All DBs
Position
2613307..2615613
Genome browser
AA seq
768 aa
AA seq
DB search
MSQASPPADPPYLQGLNEPQRDAVLTTEGPVLVLAGAGTGKTAALTRRLAHLLWTRKAYP
SEILSVTFTNKAAREMRERVGQLVGDVVEGMPWLGTFHAIGAKMLRRHAELVGLHSNFTI
LDTDDQLRLLKQLIQAEELDEKRWPARQLGGLIDSWKNKGLTPDMLDAGDNESYANGRGQ
HMYALYQERLKALNACDFGDLLLHMLTILRTHREVLEQYQQRFRYIMVDEYQDTNSVQYL
WLRLLAQERKNICCVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTPHILG
AASGVIAQNSGRLGKTLWTELDAGEKVRVIGVWDGPEEARRVGDEIERGQRDGKSLDDFA
ILVRAQHQTREFEDRFIAIGLPYRIVGGFRFYERAEIRDALAYLRVVAQPADDLAFERIV
NTPKRGLGDKAVAKVHQLARREGVPLTTAAARILDTDELTPQARRSLGNLAGDFARWRAM
GEELPHPELARQILDESGYTAMWQADRSAEAAGRLENLNELVRAMEEYETLGAFLEHVSL
VMDNDANAEEAKVTIMTIHAAKGLEFDTAFLVGWEEGVFPSQRALDEGGQASLEEERRLA
YVAITRARRVAVILHAANRRIYGQWTSSIPSRFVGELPGEHHEAETTMSGGESLWRANWS
ERSDPFADVSRGTGRGPGWQRAAGVDLKNPGGGYTKRSFNREPARVLESKASAVSFGAKP
REDLSLGQRVFHQKFGYGTIAEIEGNKLEIDFEQAGRKRVMDSFVSLG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcgtctcctcccgccgatccgccctatctccaggggctgaacgaaccccag
cgcgatgccgtgctgaccaccgaggggccggtgctggtgctcgcgggcgcggggacgggg
aagacggcggcgctcacccggcggctggcgcacctgttatggacgcgcaaggcatatccc
agcgaaatcctgtcggtgaccttcaccaacaaggccgcgcgcgaaatgcgcgagcgcgtc
gggcagctggtcggcgacgtggtcgaggggatgccgtggctcggcaccttccacgcgatc
ggcgcgaagatgctgcgccgccatgccgagctggtcgggctgcacagcaacttcaccatc
ctcgacaccgacgatcagttacgcctgctgaaacagcttatccaggccgaggaactggac
gagaaacgctggcccgcgcggcaattgggcgggctgatcgacagctggaagaacaagggg
ctgacgcccgacatgctcgatgccggcgacaatgaaagctacgccaatggccgcgggcag
catatgtacgcgctgtatcaggagcggctgaaggcgctcaacgcctgcgatttcggcgat
ttgctgctccacatgctcaccatattgcgcacgcatcgcgaggtgctggagcaatatcag
cagcgcttccgctacatcatggtcgacgagtatcaggatacgaacagcgtccagtatctc
tggctgcgcctacttgcgcaggagcgcaagaatatctgctgtgtcggcgacgatgatcag
tcgatctacagctggcgcggcgcgcaggtggagaatatcctcaagttcgaaaaggatttt
cccggtgccaaggtgatccggctcgaacagaattaccgatcgacgccgcatatcctgggc
gcggcatcgggcgtgatcgcgcagaatagcgggcggctgggcaagactttgtggaccgag
ctcgacgcgggcgagaaagtgcgcgtgatcggcgtgtgggacgggccggaggaggcacgc
cgcgtcggcgacgagatcgagcgcgggcagcgcgacggcaaatcgctcgacgatttcgcg
atcctcgtgcgcgcgcagcatcagacccgcgaattcgaggatcggttcatcgcgatcggc
ctgccctatcgcatcgtcggcggcttccgcttctacgagcgcgccgaaatccgcgatgcg
ctcgcctatctgcgcgtggtggcgcagccggcggacgatctggcgttcgagcggatcgtc
aacactcccaagcgcggcctcggcgacaaagcggtggcgaaggtgcatcagcttgcccgg
cgcgagggggtaccgctcaccaccgcggcggcgcgcattctcgataccgacgaactgacg
ccgcaggcgcggcggtcgctcggcaatctcgccggcgatttcgcgcgctggcgggcgatg
ggcgaggaattgccgcatcccgaactggcgcggcagatcctcgacgaaagcggctatacc
gcgatgtggcaggcggatcgctcggccgaggcggcggggcggctggaaaacctaaacgaa
ctcgtccgggcgatggaggaatatgaaacgctcggcgcgttcctcgaacatgtcagcctg
gtcatggacaatgatgccaacgccgaagaggcgaaggtgacgatcatgacgatccacgcc
gccaaggggctggaattcgacaccgcatttctggtcgggtgggaagaaggcgtcttcccc
agccagcgcgcgctggacgaaggcggtcaggcgagcctcgaggaggaacgccgcctcgcc
tatgtcgcgatcacgcgcgcgcggcgagtggcggtgatcctgcacgcggcgaaccggcgc
atctacggccagtggacgagcagcatccccagccgcttcgtcggcgaactgcccggcgaa
catcacgaggcggaaacgacgatgagcggcggcgaaagcctgtggcgcgccaactggagc
gagcgcagcgatcccttcgccgatgtgtcacgcggcaccgggcgcggcccgggctggcaa
cgcgcggcgggcgtcgacttgaagaaccccggcggcggctacaccaaacgcagcttcaac
cgcgaacccgcgcgcgtgctcgaaagcaaagccagcgcggtaagcttcggcgccaagccg
cgcgaggatttgtcgctgggccagcgcgtcttccaccagaaattcggatacggcacgatc
gcggagatcgaaggcaacaagctcgagatcgatttcgaacaggccgggcggaagcgggtt
atggatagctttgtgagtttggggtga
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integrated database retrieval system
