Serratia quinivorans: E4343_18160
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Entry
E4343_18160 CDS
T05941
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
squ
Serratia quinivorans
Pathway
squ03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E4343_18160 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
squ03021
]
E4343_18160 (rpoA)
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_18160 (rpoA)
Enzymes [BR:
squ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E4343_18160 (rpoA)
Transcription machinery [BR:
squ03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E4343_18160 (rpoA)
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E4343_18160 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QBX67983
LinkDB
All DBs
Position
3866389..3867378
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aatgcactgcgccgtattctgctttcgtctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcaagggaaagatgaagttatcctt
accctgaataaatctggcattggccctgtgaccgctgccgacattacccatgatggtgat
gtcgaaatcgtcaagcctcagcacgtgatctgccacctgaccgatgaaaacgctgctatc
agcatgcgtatcaaagttcaacgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgatcggtcgtctgttggttgacgcctgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtactgacctggacaag
ctggtcatcgaaatggaaaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gctaccatcctggctgaacaacttgaagcttttgttgacttacgtgatgttcgtcaacca
gaagttaaagaagagaaaccagaattcgatccgattctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcctcccgtggactgtcactgggcatgcgcctggaaaac
tggccaccggcaagcattgctgacgagtaa
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