Serratia sp. AS13: SerAS13_3875
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Entry
SerAS13_3875 CDS
T02012
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sra
Serratia sp. AS13
Pathway
sra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SerAS13_3875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sra03400
]
SerAS13_3875
Enzymes [BR:
sra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SerAS13_3875
DNA repair and recombination proteins [BR:
sra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SerAS13_3875
Prokaryotic type
SerAS13_3875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Tox-HDC
Motif
Other DBs
NCBI-ProteinID:
AEG29634
LinkDB
All DBs
Position
4147213..4147896
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AA seq
227 aa
AA seq
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MSTSLTWHDVIGKEKEQPYFHETLAFVAAERQAGKTIYPPQKDVFNAFRYTELADVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLVNMYKELATDIPGFERPSHGCLQSWAEQGVL
LLNTVLTVERGQAHSHAKLGWETFTDRVIAALNDNREGVVFLLWGSHAQKKGNIIDSKRH
HVLKAPHPSPLSAHRGFLGCRHFSQANQLLEQQGLKPIDWLPQLPQA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctccctcacctggcatgacgtcatcggcaaggaaaaagagcaaccctatttt
catgaaacgcttgcctttgttgccgctgaacgccaggccggtaagaccatttatccacca
caaaaagacgtgttcaacgccttccgctataccgaactggcggacgtgaaagtggtgatc
ctcggccaggatccttatcacggcccgaatcaggcccacggcctttctttctcggtgctt
cccggcgtgccggcgcccccttcgctggtcaacatgtataaagaattggcgacggatatc
ccgggatttgagcggccaagccacggctgcctgcaaagctgggcggaacagggcgtgctg
ctgctgaacacggtattgaccgttgaacgcggccaggcgcattcccacgcaaaactgggt
tgggaaacctttacggatagagtgatcgccgcactgaatgacaaccgcgaaggcgtggtg
tttctgctgtggggctcgcatgcccaaaagaaaggcaacattatcgacagcaagcgccac
cacgtgctgaaagcgccgcatccttcgccgctctcggcccaccgcggcttcctcggttgt
cgccatttctcgcaggccaatcaactgctggaacaacaggggctgaaacctatcgactgg
ctgccgcaactgccgcaggcataa
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