Streptococcus ratti: FY406_06285
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Entry
FY406_06285 CDS
T06620
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
srat
Streptococcus ratti
Pathway
srat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FY406_06285 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srat03400
]
FY406_06285 (xth)
Enzymes [BR:
srat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FY406_06285 (xth)
DNA repair and recombination proteins [BR:
srat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FY406_06285 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QEY08066
LinkDB
All DBs
Position
complement(1251579..1252406)
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AA seq
275 aa
AA seq
DB search
MKLISWNIDSLNAALTSDSARALLSRAVIDTLAEKKPDIIAIQETKLPAKGPTKKHLEIL
KNYFADYDIAWRSSVEPARKSYAGTIFIYKSELKPTVTYPNIGAPATMDAEGRIITLEFD
HFFVTQVYTPNAGDGLRRLEERQIWDEKYAAYLADLDKQKPVLAAGDYNVAHQEIDLAHP
ASNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVYSWWAQRSKTSKINNSGWRID
YWLTSNRIADKVLKSEMIDSGTRQDHTPILLEIDL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatttcctggaatattgattctcttaatgccgctttgactagcgattcagcc
cgggccttgctctcacgtgcggttattgatactttagctgagaaaaaacctgatatcatc
gctattcaggaaacaaagctgcctgctaaagggccgaccaaaaagcacttagaaattcta
aaaaactattttgctgactatgatattgcctggcgttcttctgtagaacctgcacgcaaa
agctatgccggcaccatatttatttataaatcagagcttaaaccaaccgtcacttaccct
aacattggcgctccggcaactatggatgctgagggccggatcattacacttgaatttgat
catttttttgttacgcaagtgtacacgcccaatgctggcgacggtctcagacgtttagaa
gaacggcaaatttgggatgaaaaatatgctgcttacctcgcagatctggataagcaaaag
ccggttttggcagcaggggactataacgtcgcccatcaagaaattgaccttgctcatcca
gccagcaaccgccgctctccaggttttacagatgaagaacgtgccggattcactaactta
ttggccaagggttttacagatactttccgctacatacacggtgacattcctgatgtttac
tcctggtgggcccaacgcagcaaaaccagcaaaatcaacaattcaggctggagaatcgat
tattggctgaccagcaatcgcattgccgataaagtccttaaatcggaaatgattgactcc
ggaacacggcaggatcacacgccgattctcttagaaatcgatttataa
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