Streptomyces rapamycinicus: M271_36535
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Entry
M271_36535 CDS
T02907
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
src
Streptomyces rapamycinicus
Pathway
src03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M271_36535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_36535
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M271_36535
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M271_36535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_16
AAA_22
UB2H
AAA_5
DUF87
UvrD-helicase
Helicase_RecD
SIKE
nSTAND3
AIG1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGP58710
LinkDB
All DBs
Position
8949399..8951543
Genome browser
AA seq
714 aa
AA seq
DB search
MRPVTQLERKVAPFEVVSPYQPSGDQPTAIADLDRRVRAGERDVVLLGATGTGKSATTAW
MIEKLQRPTLVMAPNKTLAAQLANEFRELLPNNAVEYFVSYYDYYQPEAYVPQSDTYIEK
DSSINEEVERLRHSATNSLLTRRDVVVVASVSCIYGLGTPQEYVDRMVPLKVGEEIDRDQ
LLRRFVDIQYNRNDMAFTRGTFRVRGDTIEIFPVYEELAVRIEMFGDEIEALSTLHPLTG
EVISDDQELYVFPATHYVAGPERMEKAIAGIEAELTETLARMEKQGKLLEAQRLRMRTTY
DIEMMRQIGTCSGIENYSLHIDGRETGSPPHTLLDYFPEDFLLVIDESHVTVPQIGAMYE
GDASRKRTLIEHGFRLPSALDNRPLKWEEFLERVGQTVYLSATPGTYEMSRGDGFVEQII
RPTGLVDPEVVVKPTEGQIDDLIHEIRTRTEKDERVLVTTLTKKMAEDLTDYMLELGIQV
RYLHSDVDTLRRVELLRELRAGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGT
SLIQTIGRAARNVSGQVHMYADKVTPAMAKAIDETNRRREKQVAFNKANKIDPQPLRKKI
NDIVAQIAREDVDTEELLGTGYRKTKDGKGAKAAEPAAGGKAAKGGKAKAAKGKAKEEVL
TDRPAAELAEQIEEMTDRMRAAAAELQFEVAARLRDEVSELKKELRQMREAGVS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccgtaactcagctcgaacgcaaggtggcgcccttcgaggtcgtcagcccctat
cagcccagcggtgaccagcccaccgccatcgccgacctcgaccggcgcgttcgcgcgggg
gagagggacgtcgtcctgctcggcgcgaccggcaccggcaagtccgcgaccaccgcatgg
atgatcgagaaacttcagcggcccacgctggtcatggctccgaacaagacgctggccgcc
cagctggccaatgagttccgcgagctgctgccgaacaacgcggtcgagtacttcgtctcg
tactacgactactaccagcccgaggcgtacgtcccgcagtcggacacctacatcgagaag
gactcctcgatcaacgaggaggtggagcggctgcgccattcggcgacgaactcgctgctc
acccggcgtgacgtggtcgtggtggcctccgtctcctgcatctacggcctcggtacgccg
caggagtacgtggaccgtatggtgccgctcaaggtcggcgaggagatcgaccgcgatcag
ctgctgcgccgctttgtcgacattcagtacaaccgcaatgacatggcgttcacccggggc
accttccgggtccgcggcgacaccatcgagatcttcccggtctacgaggagctcgcggtc
cgcatcgagatgttcggcgacgagatcgaggcgctgtccacgctccatccgctcaccggc
gaagtgatcagcgacgaccaggagctctatgtgttcccggccacccactatgtggccggg
cccgagcgcatggagaaggccatcgccgggatcgaggccgaactcaccgagaccctggcc
cggatggagaagcagggcaagctgctggaggcccagcggctgcggatgcgcaccacctac
gacatcgagatgatgcggcagatcggcacctgctccggtatcgagaactactcgctgcac
atcgacggccgtgagaccggatccccgccgcacaccctgctggactacttcccggaggac
ttcctcctggtcatcgacgagtcgcatgtcacggtcccgcagatcggcgcgatgtacgag
ggcgacgcctcccgcaagcggaccctcatcgagcacggcttccggctgccctccgcactg
gacaaccgccccctgaagtgggaggagttcctggagcgcgtcggccagacggtctatctc
tccgccaccccggggacgtacgagatgtcccgcggcgacggcttcgtggagcagatcatc
cgcccgaccggcctggtcgacccggaggtcgtagtcaagccgaccgagggccagatcgac
gatctcatccatgagatccgcacccgcaccgagaaggacgagcgggtcctggtcactacc
ctcaccaagaagatggccgaggacctcaccgactacatgctcgagctgggcatccaggtg
cgctatctgcacagcgatgtggacaccctgcgccgggtcgagctgctgcgcgagctgcgc
gccggcgagttcgacgtactggtgggcatcaacctgctgcgggagggcctcgaccttccg
gaggtctcgctggtcgccatcctcgacgccgacaaggagggcttcctgcgctcgggcacg
tcgctgatccagaccatcggccgtgccgcccgtaacgtctcgggccaggtgcatatgtac
gccgacaaggtcaccccggcgatggcgaaggccatcgacgagaccaaccgccgccgcgag
aagcaagtcgcgttcaacaaggccaacaagatcgatccgcagccgctgcggaagaagatc
aacgacatcgtggcccagatcgcccgcgaggacgtcgacacggaggagctgctcggcacc
ggctaccgcaagacgaaggacggcaagggcgcgaaggcggccgagccggcggccggcggc
aaggcggccaagggcggtaaggcgaaggccgccaagggcaaggccaaggaggaggtgctg
accgaccggcccgcggccgagctcgccgagcagatcgaggagatgaccgaccgcatgcgg
gccgcggcggcggagctccagttcgaggtggcggcccgactgcgcgacgaggtgtcggag
ttgaagaaggagctgcggcagatgagggaggccggagtttcctga
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