Salpingoeca rosetta: PTSG_05232
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Entry
PTSG_05232 CDS
T04136
Name
(RefSeq) eukaryotic peptide chain release factor subunit
KO
K03265
peptide chain release factor subunit 1
Organism
sre
Salpingoeca rosetta
Pathway
sre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PTSG_05232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_05232
03012 Translation factors [BR:
sre03012
]
PTSG_05232
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PTSG_05232
Translation factors [BR:
sre03012
]
Eukaryotic type
Release factors
PTSG_05232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
16074389
NCBI-ProteinID:
XP_004993810
UniProt:
F2UAW2
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MGDEPDHGVEMWKIKKLIKQLEAARGNGTSMISLIIPPKDQIPRVQKMLADEYGTASNIK
SRTNRLSVLGAITSVQQRLKLYSKVPDNGLVVYCGTIVTEEGKEKKVNIDFEPFRPINTS
LYLCDNKFHTEALSSLLEDDYKFGFIVMDGHGSLFGTLCGNTREVLHKFSVDLPKKHGRG
GQSAVRFSRLRTEKRHNYVRKVAEEAVRHFITNDKVNVTGLVLAGSADFKSELSKSDMFD
PRLQAKVIKLVDVSYGGENGFTQAIDLAAESLADVKFIQEKRLIAQYFDEIAQDTGKYCF
GVGDTIKALELGAVEKLIVWENLDVSRFELKNPSTEAITVVHLRPDQEQEKSHFVDPDGT
DLEIVSKELLIEWFSEHYKEYGTSLEIITDKSQEGSQFCKGFGGIGGLLRYRVDFTMMEY
EGEDYDDEDLDGYF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaaccagatcatggagttgagatgtggaagatcaagaagctgatcaagcag
ctcgaggccgcgagaggcaatggcaccagcatgatctccctcatcatccctcccaaggac
cagatcccgcgtgtgcagaagatgcttgcggatgagtacggcacagcatccaacatcaag
agccgaacgaacaggttgtctgtgctcggcgccatcacatctgtgcagcagaggttgaag
ctgtattccaaggtgcccgacaacggcctggtggtgtactgcggcaccattgtcacggag
gaaggcaaggagaagaaggtcaacattgactttgagcccttcaggcccatcaacacatcg
ctgtacctgtgcgacaacaaattccacacagaggcgctctcctccttgcttgaggacgac
tacaagtttggcttcattgtcatggatggccacgggtccctctttggcaccctctgcggc
aacacccgcgaagtcctgcacaagttctccgtcgacctgcccaagaagcacggccgcggt
ggtcagtctgccgttcgtttctcgcgtttgcgcacggagaagcgccacaactacgtgcga
aaggtcgccgaggaggccgtccgccactttatcacaaacgacaaggtgaacgtcacgggt
cttgtcctcgccggttctgccgacttcaagtcagagctcagcaagtcagacatgttcgac
cctcgcctgcaggcgaaagtgatcaagcttgttgatgtgtcgtacggcggagagaacgga
ttcacgcaggcgattgaccttgcggcggagtcgctggcggacgtcaagtttatccaggag
aagcgcctcattgcgcagtactttgacgagattgcccaggacacgggcaaatactgcttt
ggcgtcggcgacaccatcaaggccctcgagctcggtgctgttgagaagctgattgtgtgg
gagaaccttgacgtgtcgcggtttgagctgaagaacccctccacagaggccatcaccgtc
gtccacctccgcccagaccaggagcaggagaagtcgcactttgtcgacccggacgggacg
gatcttgagattgtgtcgaaggagctgctgattgagtggttctctgagcactacaaggag
tacggcacctccctcgagattatcacagacaagtcccaggagggctcccagttctgcaag
ggctttggcggcattggcggcctgcttcgttaccgcgtcgacttcaccatgatggagtac
gagggcgaggactatgacgacgaggacctcgacggttacttctaa
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