Sediminicoccus rosea: LHU95_15085
Help
Entry
LHU95_15085 CDS
T08103
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
srf
Sediminicoccus rosea
Pathway
srf02024
Quorum sensing
srf03060
Protein export
srf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LHU95_15085 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LHU95_15085 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_15085 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
srf02044
]
LHU95_15085 (ffh)
Enzymes [BR:
srf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LHU95_15085 (ffh)
Secretion system [BR:
srf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LHU95_15085 (ffh)
Eukaryotic Sec-SRP protein
LHU95_15085 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
ArsA_ATPase
AAA_31
AAA_33
AAA_22
AAA_16
6PF2K
Motif
Other DBs
NCBI-ProteinID:
UPY35541
LinkDB
All DBs
Position
complement(3181646..3183019)
Genome browser
AA seq
457 aa
AA seq
DB search
MFETLGNRLQGVFDRLRGRGALSEADVNDALREVRVALLEADVALSVVKDITARVRERAV
GQEVIRSIQPGQQVVKIVNDALVEALGGNDPGPRGISLEAAAPVAILMVGLQGSGKTTTS
GKIALRLKGRERKKVLLASLDVHRPAAQLQLAQLAERAEVTSLPIIAGQTPLQIAERAMD
LGRRELYDVVILDTAGRLSIDDALMDEVAAVKAAVTPHETLLVVDAMTGQDAVNTARIFN
ERLGISGIVMTRVDGDARGGAALSMRAVTGAPIKLLGAGEKLDALEDFHPDRIANRILGM
GDIVSLVERAVENIDQAEAEKLAARMQKGQFSLEDYASQLKQIGKMGGMSGLMGMLPGIA
KVKAQLQDANLDTGMLRRQAAIIGSMTVGERRKPEIIKASRKRRIAAGSGASVQEVNRLL
KQFEDMRDMMKRMNKMGQKGMMRGGLAALMPQGRRPF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagacgttgggcaacaggttgcagggagtgttcgaccgcctgcgcggccgtggc
gccctgtccgaagccgacgtcaatgacgcactgcgcgaagtccgcgtggccctgctggaa
gctgatgtcgccctctcggtcgtgaaggatatcacggcccgcgtgcgcgaacgggctgtg
ggccaggaggtgatccgctcgatccagcccggccagcaggtcgtgaagatcgtcaatgac
gcgctggttgaagcgctgggcggcaatgatcccgggccgcgcggcatcagcctggaagcc
gccgcccccgtcgccatcctgatggtcggcctgcaaggctcgggcaagacgacgacctcg
ggcaagatcgcgctgcgcctgaaggggcgggagcgcaagaaagtgctgctggccagcctc
gacgtgcaccgccccgccgcccagctccagctggcgcagctggccgagcgggcggaagtc
accagcctgccgatcatcgccggtcagacgcccttgcagatcgccgagcgcgccatggat
ctgggccggcgcgaactttatgatgtcgtgatcctcgataccgccggccgcctctcgatc
gacgatgcgctgatggatgaggtggccgccgtgaaggccgccgtcacgccgcatgagacg
ctgctcgtcgtagatgcgatgaccggccaggatgccgtcaataccgcgcgcatcttcaat
gaacggctggggatctccggcatcgtgatgacgcgcgtggatggcgatgcgcgcggtggc
gcggccctctccatgcgggccgtcaccggtgcgcccatcaagctgctgggtgcgggcgaa
aagctcgacgcgctcgaggatttccaccccgaccgcatcgccaaccgcatcctgggcatg
ggcgacatcgtctccctcgtcgagcgggcggtggagaatattgaccaggccgaggcggag
aagctcgcggccaggatgcagaaggggcagttcagcctcgaagactatgccagccagttg
aagcagatcggcaagatgggcgggatgagcggcctgatgggcatgctgccgggcatcgcc
aaggtgaaggcgcagcttcaggacgccaatctggacaccggcatgctgcgcaggcaggcc
gccatcatcggcagcatgacggtgggtgagcgccgcaagcccgagatcatcaaggcgtcg
cgcaagcggcgcatcgcggccggttcgggcgcctccgtgcaggaggtgaaccgcctgctc
aaacaattcgaggacatgcgcgacatgatgaagcgcatgaacaagatgggccagaaaggg
atgatgcgcggcgggctcgccgcgctcatgcctcagggccgccgacctttttag
DBGET
integrated database retrieval system
