KEGG   Stenotrophomonas rhizophila: BAY15_1293
Entry
BAY15_1293        CDS       T04500                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
srh  Stenotrophomonas rhizophila
Pathway
srh02024  Quorum sensing
srh03060  Protein export
srh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:srh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BAY15_1293
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BAY15_1293
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BAY15_1293
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:srh02044]
    BAY15_1293
Enzymes [BR:srh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BAY15_1293
Secretion system [BR:srh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BAY15_1293
  Eukaryotic Sec-SRP protein
   BAY15_1293
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 Helicase_RecD CbiA cobW AAA_16 AAA_33 YqeC ABC_tran KTI12 AAA_31 APS_kinase ResIII ATP_bind_1 AAA_14 ParA TsaE DO-GTPase1 AAA AAA_19 nSTAND3 SR_plectin_7 Thymidylate_kin AAA_5 NPHP3_N Rad17 AAA_17 NACHT ArsA_ATPase GTP_EFTU AAA_18 DUF3731 AAA_30
Other DBs
NCBI-ProteinID: AOA71727
UniProt: A0AAP5AJN2
LinkDB
Position
1460248..1461627
AA seq 459 aa
MFESLTQRLSGTIERLRGRGRLTEENIREATREVRIALLEADVALPVVQALVERIKVRAV
GQEVLKSLTPGQALIKVVRDELTAVMGSAASDLNLNVPAPAIILMAGLQGAGKTTTVGKL
AKHLKEKRKKKVMVVSADVYRPAAIEQLKTLADQVGVLFFPSSADQKPEAIVRAAIDDAR
KSFVDVLLVDTAGRLAIDEAMMAEIKALHAAVNPAETLFVVDAMTGQDAANTAKAFGEAL
PLTGVVLTKTDGDARGGAALSVRYITGKPIKFVGVSEKPDGLDVFHPDRIASRILDMGDV
LSLVEQVEQQVDKDKAQKLAEKVAKGKKFDLNDMRDQLEQMQNMGGIGGLMDKLPGLGQI
PEHLKQQVSQGKEVPRMIAIINSMTKKERRNPGLLNGSRRARIARGSGLTPADVNKLMKQ
YQQMEKMMSKMAGGGMKGMMRSMKGMMGAMGGRGGMPFR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgttcgagtccctgacccagcgcctctccggcaccatcgagcggctgcgtggccgcggt
cgcctcaccgaggaaaacatccgcgaggccacccgcgaagtccgcatcgcgctgctggaa
gccgacgtcgccctgccggtcgtgcaggccctggtcgagcgcatcaaggtgcgcgcggtc
ggccaggaagtgctcaagtcgctgaccccgggccaggcgctgatcaaggtggtgcgcgac
gagctgaccgccgtgatgggctcggccgcctccgacctgaacctcaatgtgccggccccg
gccatcatcctgatggcgggcctgcagggtgcgggcaagaccaccacggtgggcaagctg
gccaagcacctgaaggaaaagcgcaagaagaaagtgatggtggtgtcggccgacgtctat
cgtccggccgcgatcgagcagctcaagaccctggccgaccaggtgggcgtgctgttcttc
ccgtccagcgccgaccagaagcccgaagccatcgtgcgcgcggccatcgatgatgcgcgc
aagtcgttcgtggacgtgctgctggtggataccgccggccgcctggccatcgacgaagcg
atgatggcggagatcaaggccctgcacgcggcggtgaacccggctgaaaccctgttcgtg
gtcgatgccatgaccggccaggacgcggccaacaccgccaaggccttcggtgaagcgctg
ccgctgaccggcgtggtgctgaccaagaccgacggtgacgcccgtggcggtgccgcgctg
agcgtgcgctacatcaccggcaagccgatcaagtttgtcggcgtcagcgaaaagcccgac
ggcctggacgtgttccacccggaccgtatcgccagccgcatcctggacatgggcgacgtg
ctgtcgctggtggagcaggtcgagcagcaggtcgacaaggacaaggcgcagaagctggcc
gagaaggtcgccaagggcaagaagttcgacctgaacgacatgcgcgaccagctcgagcag
atgcagaacatgggcggcatcggcggcctgatggacaagctgccgggcctgggccagatc
cccgagcacctcaagcagcaggtcagccagggcaaggaagtgccgcgcatgatcgccatc
atcaattcgatgaccaagaaggagcgccgcaacccgggcctgctcaacggctcgcgccgt
gcccgcatcgcgcgcggttccggcctgactccggccgacgtcaacaagctgatgaagcag
tatcagcagatggaaaagatgatgagcaagatggccggcggcggcatgaagggcatgatg
cgcagcatgaagggcatgatgggtgccatgggcggccgcggcggcatgccgttccgctga

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