Stenotrophomonas rhizophila: BAY15_2721
Help
Entry
BAY15_2721 CDS
T04500
Name
(GenBank) ATP-dependent DNA ligase
Organism
srh
Stenotrophomonas rhizophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
SAF
Motif
Other DBs
NCBI-ProteinID:
AOA73155
UniProt:
A0A1B2N6M7
LinkDB
All DBs
Position
3100056..3101660
Genome browser
AA seq
534 aa
AA seq
DB search
MKAFAALYQRLDRSTATSDKRAALVAYFRDARPHDAAWALYLLSGGKVGGARRKIAASGE
LRAWIAEASGLPAWLVADSYDQVGDLAETLTLLLDDPAEGAQDRPLADWIEGHLLAVANQ
PEPVRRVAVEAGWRQLPAAERLVFNKLLTGALRVGVSQRLVQQALAELSGIDIARIAQRM
LGEWVPSPGLLANLLSAEERPEDRQQPYPFFLASPLEAEADSLGPIGEWTLEWKWDGIRL
QVLRRKGEVALWSRGEERLDGRFPEIEAAAMALPDGTVIDGELLAWRDDDAQPLPFTALQ
TRIQRRRPGPKTLRDTPVRVLAYDLLELDGNDLRQQPLAERRTLLAGLLATLGDTRMVLS
PTLDATDWQDAAAQRALARERGVEGLMLKRSTSVYQGGRRRGDWWKWKIEPLTIDAVMIY
AQAGHGRRSTLYTDYTFGVWDGERLVPVAKAYSGLDDKEILALDRWIRANTIERFGPVRS
VRGEQVFELGFEAVNRSSRHKSGIAVRFPRILRWRHDKPAGEADTLAQLQALAR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatttgccgcgctgtatcagcgcctggaccgcagcaccgccacgtcggacaaa
cgcgccgcgctggtggcttacttccgcgacgcgcgcccgcatgacgcagcgtgggcgctg
tacctgctcagcggcggcaaggtcggtggcgcacgccggaagatcgcggccagcggcgag
ctgcgcgcgtggatcgccgaggcatcgggcctacccgcgtggctggtggccgacagctac
gaccaggtcggcgacctggccgaaaccctgaccctgctgttggatgatcctgcggaaggc
gcgcaggaccgcccccttgccgactggatcgaaggccacctgctggcggtggcgaaccag
ccggaaccggtacgtcgtgttgcggtggaggcaggctggaggcagctgcctgccgccgaa
cggctggtattcaacaagctgctgaccggggcgttgcgcgtaggcgtctcccagcggctg
gtccagcaggcgctggcggaactgtcggggatcgacatcgcccgcatcgcgcagcgcatg
ctgggcgagtgggtgccctcgccggggctgctcgccaacctcctcagcgctgaagaacgg
ccggaagaccgccagcagccgtatccgttcttcctggcctcgccattggaagccgaggcc
gacagcctgggcccgatcggcgagtggacgctggaatggaagtgggatgggatccgcctg
caggtgctgcgtcgcaaaggcgaagtcgccctgtggtcgcgcggcgaagagcggctggat
gggcgctttccggaaatcgaagcggccgcgatggcgttgccggatggcaccgtgatcgat
ggcgagcttctcgcctggcgcgatgacgatgcacagccgctgcctttcaccgccctgcag
acccggatccaacggcgcagacccggcccgaagacgttacgcgatacgccggtgcgcgtg
cttgcctacgacctgctcgaactcgacggtaacgatctgcgccagcagccgctggccgaa
cggcgcaccctgctcgccggattgcttgccacgctcggcgatacgcgcatggtgctgtcg
cccacgcttgatgccacggactggcaggacgccgccgctcagcgggcattggcgcgcgaa
cgcggcgtggaagggctgatgctcaagcgcagcacgtcggtctaccagggcgggcgccgc
cgtggcgactggtggaagtggaagatagaaccgctgaccatcgatgcggtgatgatctac
gcgcaggcgggacatggccggcgcagcacgctgtacaccgactacaccttcggggtgtgg
gacggcgagcgactggtgccggtggccaaggcgtattcggggctggacgacaaggaaatc
ctggccctggaccgctggatccgggccaacacgatcgaacgcttcgggccggtgcgcagc
gtccgtggcgagcaggtgttcgaactcggctttgaagcggtcaaccgcagcagccggcac
aagtcgggcatcgcagtgcgcttcccgcgcatcctgcgctggcgccacgacaagccggcc
ggcgaagccgacacgctggctcagctgcaggcactggcacggtga
DBGET
integrated database retrieval system
