Stenotrophomonas rhizophila: BAY15_3349
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Entry
BAY15_3349 CDS
T04500
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAY15_3349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srh03400
]
BAY15_3349
Enzymes [BR:
srh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAY15_3349
DNA repair and recombination proteins [BR:
srh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAY15_3349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
PriA_CRR
AAA_30
zinc-ribbons_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AOA73781
UniProt:
A0A1B2N8C5
LinkDB
All DBs
Position
3829813..3832044
Genome browser
AA seq
743 aa
AA seq
DB search
MLPPDPAPLLTLESAPAPLPDAPSLQVALPLPLPQWFDYAPPPGAPPGPGMVGRRLRVPF
GSRELVGVVAGIGTVTDGNALRAAVEWLDPAPLLGGELWTSLQWLARYTHAPLGEVVSTA
LPAPLRRGEPVPDTHRWGWQLTAEGLEHRAKLRAGTRPHRLAEQLAGGSVDEDLLDEAMD
DWRSAARSLAKRGLVERIALEHAPAMPALRPGPTPNAEQANAIAAITAHARFGAFLLDGV
TGSGKTEVYLQAIVDCLARGRQALVLVPEIGLTPQTLARFRSRLGIAVHVLHSGLNDNER
ARVWAATARGEAQVIVGTRSAVFTPLPNAGLIVVDEEHDGSYKQQDGIRYHARDFALVRA
KALDVPVVLGSATPSLESLHNAHAGRYTHLRLKQRAGEARPPRVRVLDVRKRPLKDGLSP
EVMEGIGQHLAAGHQVLVFKNRRGYAPVLLCHDCGWTAPCKRCDAPMTVHAGGRRLQCHH
CGARQPAPLACPDCASLALQPQGIGTERLEEHLAEAFADFPVIRIDRGTTNRRDALETQL
ATLGDRAGILVGTQILAKGHDLPKLTLVVVVGIDEGLFSADFRASEKLAQQLIQVAGRAG
RATDAGEVWLQTHHPGHPLLETLVNGGYHAFADAELQQREAAGFPPFAHLALMRAEAQQV
EHANAMLMAVRELIAHECPVERFGPMPAPMPRRAGYQRTQLLLSAPARRPLHALLDQIMP
QVYGLPQARKVRWSLDVDPTDLY
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccccgatccagcccccctgctgaccctggaaagtgccccggcgccgctgccg
gatgccccctccctccaggttgccctgcccctgccgctgccgcagtggttcgactacgcg
ccgccgccgggagcgccgcccgggcctggcatggtcggtcgccggctgcgggtgccgttc
ggctcgcgcgagctggtgggcgtggtggccgggatcggtacggtgaccgacggcaacgcg
ctgcgcgctgccgtggaatggctggacccggcgccgctgctgggcggcgagctgtggacc
tcgctgcagtggctggcacgctatacccatgcgccgctgggcgaggtggtcagcaccgcc
ctgcccgcgccattgcgccgtggtgagccggtgcccgacacccatcgctggggctggcag
ctcactgccgaaggactcgaacaccgcgccaagctgcgggccggcacccgtccgcaccgc
ctggccgaacagctggccggcggcagcgtggacgaggacctgctcgacgaggcgatggac
gactggcgcagcgcggcgcgctcgctggccaagcgcggcctggtcgagcgcatcgcgctg
gagcacgccccggcgatgccggccctgcggccggggccgaccccgaatgcggagcaggcc
aacgccatcgccgcgatcaccgcccacgcgcggttcggcgcgttcctgctcgacggggtg
accggcagcggcaagaccgaggtgtacctgcaggccatcgtggactgcctggcccgcggc
cggcaggcgctggtgctggtgcccgagatcgggctgaccccgcagacgctcgcgcgcttc
cgcagccgcctgggcattgcggtgcacgtgctgcattcgggcctgaacgacaacgagcgc
gcacgggtctgggcggccaccgcgcgcggcgaggcacaggtgatcgtgggcacgcgctcg
gcggtgttcaccccgttgcccaacgccgggctgatcgtggtcgatgaagagcacgacggc
agttacaagcaacaggacggcattcgttaccacgcgcgcgatttcgcgctggtgcgggcc
aaggcgctggatgtgccggtggtactgggcagcgccacgccgtcgctggaatcactgcac
aacgcacatgccggccgctacacccatctgcgcctgaaacagcgcgcaggcgaggcgcgc
ccgccgcgggtgcgggtgctggacgtgcgcaagcgcccgttgaaggacggcctttcgccc
gaggtgatggaaggcatcggccagcacctggcggccggccaccaggtgctggtgttcaag
aaccgccgcggttacgcaccggtgctgctgtgccacgactgcggctggaccgcgccctgc
aaacgctgcgatgcgccgatgaccgtgcacgccggcggccgccggctgcaatgccaccac
tgcggcgcgcgccagccggcgccactggcctgccccgactgcgccagcctggcgctgcag
ccacagggcatcggcaccgagcggctggaagaacacctggcggaagccttcgccgatttc
ccggtgatccgcatcgaccgcggcaccaccaaccggcgcgacgcgctggagacccaactt
gccacgctgggcgaccgcgccggcatcctggtcggcacccagatcctggccaagggccac
gacctgcccaagctgaccctggtggtggtggtgggcatcgacgagggactgttctccgcc
gatttccgcgccagcgagaaactggcccagcagctgatccaggtggccgggcgcgcgggg
cgcgccaccgatgccggcgaagtctggctgcagacccatcaccccgggcacccgttgctg
gaaacactggtcaacgggggctaccacgccttcgccgacgccgagctgcagcagcgcgaa
gcggccggcttcccgccgttcgcgcacctggcgctgatgcgcgccgaggcgcagcaggtg
gagcacgccaacgccatgctgatggcggtgcgcgagctgatcgcgcatgagtgccccgtg
gaacgcttcggcccgatgccggcgccgatgccgcgccgcgccggttaccagcgcacgcag
ctgctgctgtcggccccggcgcggcggccgctgcatgcgctgctggatcagatcatgccg
caggtgtacggcttgccgcaggcgcgcaaggtgcgctggtcattggacgtcgatcccacc
gacctgtattga
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