Spirosoma rhododendri: HH216_03780
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Entry
HH216_03780 CDS
T08048
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
srho
Spirosoma rhododendri
Pathway
srho02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HH216_03780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_03780
Transporters [BR:
srho02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HH216_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
nSTAND3
AAA_18
DUF87
SMC_N
AAA_22
RsgA_GTPase
AAA_28
AAA_29
PEPCK_ATP
MMR_HSR1
AAA_16
TsaE
AAA_7
NACHT
AAA
Zeta_toxin
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QJD77631
UniProt:
A0A7L5DJJ7
LinkDB
All DBs
Position
complement(977730..979511)
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AA seq
593 aa
AA seq
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MKALSYLNKYLVKYKWYLIWGTVFTAISNLFGIFPAQLVRYALDLVRETLDTYHLYDGST
LQPALYSIFAFSLLLFAGGTLALALLKGFFLFLVRQTLIVMSRHIEYDLKNEIYDHYQTL
PLSFYRQHNTGDLMARISEDVSKVRMYVGPSIMYGVNLIVLFILVITYMVSINARLSAYV
LLPLPILSVLIYLVNNIIIRKSEEIQASLSKMSTYVQEAFSGIRVLKAFVQEQQSAARFE
VESDTYRAKSLSLTKVDSLFFPIVAILVGLSNILVVYIGGQEIIAGRLTPGNITEFILYV
NMLTWPVMALGWTTSQTQRAAASQARINEFLNIKTNIVSKKDINRSIQGEIDFRNVRFVY
PDSGIVALHNFSMHVKAGETVAILGTTGSGKTTLANLLTRMYDVSSGEIRIDNTPIVDYN
LTSLRSQMGYVPQDVFLFSETISNNVRFGRPDLPQARVEQAVRDADLYQNVIDFPEGFDT
AVGERGVTLSGGQKQRLSIARAIARDPRILILDDCLSAVDTNTENIILNNLRRIMADRTS
VIISHRVSSAKLADYIIMLDEGTIVEEGTQAELMARNGAFRELYEKQLQTEEV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcactttcctacctcaacaaatacctcgttaagtataaatggtacctgatctgg
ggtacggtctttacggccatttccaacctattcggtatcttccctgcccaactcgttcgg
tacgccctcgacctggtgcgcgaaacactcgacacctaccatctctacgacggctcgacg
ctgcaaccggcactgtacagcattttcgcatttagcctgctgctgtttgccgggggtacg
ctggcattggccctgctgaaaggttttttcctgttcctcgtccggcagacgctgatcgtg
atgtcgcggcacatcgaatacgacctcaaaaacgagatttacgatcactaccagaccctg
ccgctgagtttctaccggcagcacaacaccggcgacctgatggcgcgtatctcggaagac
gtcagtaaagtgcggatgtacgtcgggccgagtatcatgtacggtgtcaacctgatcgtg
ctgtttatcctggtcattacgtacatggtcagcatcaacgcccggctatcggcctacgtg
ctgttgccgttgccgattctgtcagtgctgatttatctggtcaataacatcatcatccgt
aagtcggaggaaattcaggcgagcctgtcgaagatgtcgacttatgtgcaggaagcgttt
tcggggattcgggtgctgaaagccttcgttcaggaacaacaatcagccgcgcgttttgaa
gtcgagagcgacacgtaccgggctaaatcactgagtctgacaaaagtcgattcgttgttc
ttccccatcgtggccattctggttgggctgagtaatatcctcgtcgtgtatatcggtggt
caggaaatcatcgccggtcgactgacgccgggtaacatcaccgagttcatcctgtacgtc
aacatgctgacctggcccgtcatggctctgggctggacgacaagtcagacgcaacgggca
gccgcgtcgcaggctcgaatcaacgagtttcttaatatcaagaccaacatcgtatcgaag
aaggatatcaaccggtcaattcagggcgagattgactttcgtaacgtccggtttgtatat
cctgattcgggtatcgtcgccctgcacaacttctcgatgcatgtgaaggcgggcgaaacc
gtcgccattcttggtacaacaggttcaggaaagactaccctcgccaacctgctcacccgg
atgtacgatgtatcgtcgggcgagatccgcatcgataacacgcccatcgttgattacaac
ctgacctcgttgcggagtcagatgggctacgtgccgcaggatgtttttctgttctcggaa
acaatcagcaacaacgttcgctttggccgacccgacctgccgcaggcgcgtgtcgagcag
gccgttcgcgacgccgacttgtaccagaacgtgatcgatttccccgaaggcttcgatacg
gccgtgggtgagcggggcgttacgctgtcgggtggacagaagcagcggttgagtatcgcc
cgtgccatcgcccgcgacccgcgcatcctgattctggacgactgtctatcagcggttgac
acgaacacagaaaatatcatcctgaacaacctgcgccggatcatggccgaccgtacgtcg
gttatcatttcgcaccgtgtatcgtccgccaaactcgccgactacatcatcatgctcgat
gagggcactattgttgaagaaggtacgcaggccgaattgatggcccgcaacggtgccttc
cgcgagctgtacgagaagcagttacagaccgaggaggtgtaa
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