Streptomyces rochei: SRO_3070
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Entry
SRO_3070 CDS
T06265
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
srj
Streptomyces rochei
Pathway
srj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SRO_3070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srj03021
]
SRO_3070
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_3070
Enzymes [BR:
srj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SRO_3070
Transcription machinery [BR:
srj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SRO_3070
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SRO_3070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BBC94246
LinkDB
All DBs
Position
complement(3440581..3444066)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEE
ALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GDYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADAPLDAGILTVEDIISTIKYLVQLHAGETETTGDNGGTIVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVIDGQVTDEVDYLTADEEDRFVIAQANAPLTDELRF
AEARVLVRRRGGEVDYVGGEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRSAVDAGDVVKAEKAGVVQEVSADYVTTANDDGTYITYRLHK
FSRSNQGTSVNQKVIVNEGDRIIEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKINPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLAEEWAERLQAIGADQVAPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaacggcgcaagcaccgccccg
ctgcgcatttcctttgcaaagatcaaggagcctctcgaggttccgaacctgctcgcgctg
cagaccgagagctttgactggctgctcggcaacaccgcctggcagagtcgggtcgaggag
gctctggagaacggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtccctgacgttccgggaccaccgcttc
gagccgccgaagaactccatcgacgagtgcaaggaccgcgacttcacgtacgccgccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggtgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgacgaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcccagctggtccgttcccccggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgtatcgaccgcaagcgcaagcag
tcggtcaccgttcttctgaaggcgctcggttggaccaccgagcagatcctcgaagagttc
ggcgactacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccccccacgcgtgaggccgcg
cagacgcttcttgagaacctctacttcaacccgaagcgctacgacctcgcgaaggtcggc
cgctacaaggtcaacaagaagctgggcgccgacgccccgctggacgcgggcatcctgacc
gtcgaggacatcatctcgacgatcaagtacctcgtgcagctgcacgccggcgagaccgag
acgacgggtgacaacggcggcacgatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcagcgtcggcgagctcatccagaaccaggtccgtacgggtctggct
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggctcttggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccctcgcactacggccgcatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgggtcaacgcgttcggtttcgtcgagacc
ccgtaccgcaaggtcatcgacggccaggtcaccgacgaggtcgactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgccccgctgacggacgagctgcgcttc
gccgaggcccgcgtgctggtccgccgccgcggcggcgaggtcgactacgtcggtggcgag
gacgtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
cccttcctggagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgccag
gccgtgcccctgatcaagtccgaggccccgctcgtcggcaccggcatggagtaccgctcc
gccgtggacgccggcgacgtcgtcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacgtcaccacggcgaacgacgacggcacgtacatcacgtaccgcctgcacaag
ttctcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggtgac
cggatcatcgagggccaggtcctcgccgacggtccggccaccgagaacggtgagatggcc
ctgggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgtatcggtgcc
gaggtcatcgccggcgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acccccgaggagcgcctgctgcgcgccatcttcggtgagaaggcccgtgaggtccgcgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtgcgcgtcttcgac
cgcgaggagggcgacgagctgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgacacggcaacaagggcgtc
atctccaagatcaacccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtgccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgcggaggagtgggcc
gagcgccttcaggccatcggcgccgaccaggtcgcccccggcaccaacgtcgccaccccg
gtgttcgacggtgcccgcgaggacgagctggcgggtctgctccagcacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgaccggtaaggcgcggctgttcgacggccgtagc
ggtgagccgttcccggacccgatctcggtcggctacatgtacatcctgaagctccaccac
ctggtcgacgacaagctgcacgcccgttcgaccggcccgtactcgatgatcacccagcag
ccgctgggcggtaaggcgcagttcggtggccagcgcttcggcgagatggaggtgtgggcc
ctcgaggcctacggcgccgcgtacgccctccaggagctgctcaccatcaagtccgacgac
gtcaccggccgcgtgaaggtgtacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtcgctctgcctgaacgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgtgacaccgacgaggatgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
