Streptomyces rochei: SRO_3671
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Entry
SRO_3671 CDS
T06265
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srj03032
]
SRO_3671
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_3671
Enzymes [BR:
srj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SRO_3671
DNA replication proteins [BR:
srj03032
]
Prokaryotic type
DNA Topoisomerases
SRO_3671
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SRO_3671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BBC94847
LinkDB
All DBs
Position
complement(4091267..4093345)
Genome browser
AA seq
692 aa
AA seq
DB search
MLCQCQKGRFVADSGNPNENIPSTDAGVNAEAPASTASYDASAITVLEGLDAVRKRPGMY
IGSTGERGLHHLVYEVVDNSVDEALAGYADLIDVTILPDGGVRVVDNGRGIPVGIVPSEG
KPALEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSGKVSVEVKTDGYRWTQDYKM
GVPTAPLAQHEATEETGTSVTFWADPEIFETTEYSFETLSRRFQEMAFLNKGLNIRLTDE
RESAKATSGADEAGADEKAEVKSVTYHYEGGIVDFVKYLNSRKGEVVHPTIIDLEAEDKD
KSLSLEVAMQWNSGYSEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLREKD
DNLTGDDIREGLTAIISVKLSEPQFEGQTKTKLGNTEAKTFVQKAVYEHLNDWLDRNPNE
AADIIRKGIQAATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDS
AGGSAKSGRNPQYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIEKL
RYHKIILMADADVDGQHISTLLLTFLFRFMRPLVEAGHVYLSRPPLYKLKWGRDDIEYAY
SDRERDALIEMGRQRGKRVREDSIQRFKGLGEMNAEELRVTTMDQEHRVLGQVTLDDAAQ
ADDLFSVLMGEDVEARRQFIQRNAKDVRFLDI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaac
atcccgtccaccgacgccggcgtgaacgccgaggccccggcctcgacggcttcttacgac
gccagcgccatcaccgtgctcgaagggctggacgcggtccgcaagcggcccggcatgtac
atcggctccacgggcgagcgcggactgcaccacctggtgtacgaggtcgtcgacaactcg
gtcgacgaggcgctggcgggttacgcggacctcatcgacgtgacgatcctccccgacggc
ggcgtccgcgtcgtcgacaacggccgcggcatcccggtaggcatcgtgccgtccgagggg
aagccggccctggaggtcgtgctgaccgtgctgcacgcgggcggcaagttcggcggcggc
ggctacgccgtctccggcggtctgcacggcgtcggcgtgtccgtcgtgaacgccctgtcc
ggcaaggtctccgtcgaggtcaagaccgacgggtaccggtggacgcaggactacaagatg
ggcgtgcccaccgccccgctggcccagcacgaggccaccgaggagaccggtacgtcggtc
accttctgggccgacccggagatcttcgagaccaccgagtactccttcgagacgctgtcc
cggcgcttccaggagatggccttcctcaacaagggcctgaacatcaggctcaccgacgag
cgcgagtcggcgaaggccaccagcggcgcggacgaggcgggcgcggacgagaaggccgag
gtcaagtcggtcacgtaccactacgagggcggcatcgtcgacttcgtgaagtacctcaac
tcccgcaagggagaggtggtgcacccgaccatcatcgacctggaggcggaggacaaggac
aagagcctgtccctcgaggtcgcgatgcagtggaacagcggctacagcgagggtgtgtac
tcgttcgccaacatcatccacacgcatgagggcggcacccacgaggagggcttccgcgcc
gcgctgacgtcgctgatcaacaagtacgcgcgcgacaagaagctgctccgggagaaggac
gacaacctcaccggtgacgacatccgcgagggtctgaccgcgatcatctcggtcaagctc
agcgagccgcagttcgagggccagaccaagaccaagctgggcaacacggaggccaagacc
ttcgtgcagaaggcggtctacgagcacctgaacgactggctggaccgcaacccgaacgag
gccgcggacatcatccgcaagggcatccaggccgccaccgcgcgtgtcgcggcccgcaag
gcccgtgacctcacgcggcgcaagggcctgctggagtcggcgtccctgccgggcaagctg
tccgactgccagtcgaacgaccccaccaagtgcgagatcttcatcgtcgagggtgactcc
gccggcggttcggccaagtccggccgcaacccgcagtaccaggcgatcctcccgatccgc
ggcaagatcctgaacgtggagaaggccaggatcgacaagatccttcagaaccaggagatc
caggcgctgatctccgccttcggcacgggtgtgcacgaggacttcgacatcgagaagctc
cgctatcacaagatcatcctgatggcggacgccgacgtcgacggccagcacatcagcacc
ctgctgctgaccttcctgttccgcttcatgcggccgctggtcgaggccgggcacgtgtac
ctctcccgcccgccgctctacaagctcaagtggggccgggacgacatcgagtacgcctac
tcggaccgcgagcgcgacgcgctgatcgagatgggccgccagcgcggcaagcgggtccgc
gaggactcgatccagcgcttcaagggcctcggcgagatgaacgccgaggaactgcgcgtg
accacgatggaccaggagcaccgtgtgctcggccaggtcaccctggacgacgccgcccag
gccgacgacctgttctcggtgctgatgggcgaggacgtcgaggcacgccgccagttcatc
cagcgcaacgccaaggacgtccgcttcctcgacatctga
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