Serratia plymuthica 4Rx13: SOD_c09190
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Entry
SOD_c09190 CDS
T02710
Symbol
ispA
Name
(GenBank) farnesyl diphosphate synthase IspA
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00900
Terpenoid backbone biosynthesis
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
Module
srl_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SOD_c09190 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
srl01006
]
SOD_c09190 (ispA)
Enzymes [BR:
srl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SOD_c09190 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SOD_c09190 (ispA)
Prenyltransferases [BR:
srl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SOD_c09190 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AGO53916
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All DBs
Position
complement(1006186..1007106)
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AA seq
306 aa
AA seq
DB search
MSEIVQQAAFSEQLQAFRQRADRALLDFIAPLPFNEGNMVAAMRHGALLGGKRLRPFLVY
TTGQMFGVSLNNLDVPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEASAILA
GDALQTLAFSILADADMPDVALRDRLAMVSELATASGAAGMCGGQSLDLEAEGRQIDLPA
LELIHRHKTGALIRAAVRLGALAAGEPGRAALPQLDRYAAAIGLAFQVQDDILDVVGETE
KIGKRQGADQQHGKSTYPALLGLDSAKAKAWDLYQEALAALDTLAAQSYNTAPLRALASF
IIERDN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatcgtccaacaggccgctttttctgagcagttacaggcttttcgccagcgg
gccgaccgcgcgctgctggattttatcgcgccgctgccgttcaatgaaggcaacatggtg
gccgccatgcgccacggcgcgctgctgggcggcaaacgtctgcgcccgttcctggtgtat
accaccgggcagatgtttggcgtttcactgaataatttggatgtgccggccgctgcggta
gaatgcattcatgcctattcgttgatccacgacgatcttccggcaatggacgatgacgat
ctgcgtcgcggtcagcctacctgccatatcaaatttggtgaagccagcgcgatcctggcg
ggtgatgcactgcagacgctggcattttccattctggccgatgccgacatgcccgacgtg
gcgctgcgcgatcggctggccatggtgtccgaactggcgaccgccagcggcgctgccggc
atgtgcggtggccagtcgttggatctcgaggctgaaggcaggcaaattgatctgcctgcg
ctggaactgatacaccgccacaagaccggcgcattaatccgcgcggcggttcgccttggg
gctttggccgccggtgaacctggccgtgcagcgctgccgcagcttgaccgttacgctgcg
gcgatcggcctggcgtttcaggtacaggatgacattttggacgttgtcggcgaaaccgag
aaaatcggtaaacgccagggagcggaccagcaacacggaaagagcacctatccagctttg
ctcgggcttgacagcgcgaaagcaaaagcgtgggatctctatcaggaagctttagctgca
ttagacactttggcagcgcaatcttataacacagcgccattgcgagcgttagccagcttc
attattgaacgcgacaattaa
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