Serratia plymuthica 4Rx13: SOD_c36550
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Entry
SOD_c36550 CDS
T02710
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase Ung
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOD_c36550 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c36550 (ung)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SOD_c36550 (ung)
DNA repair and recombination proteins [BR:
srl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOD_c36550 (ung)
Prokaryotic type
SOD_c36550 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGO56613
LinkDB
All DBs
Position
4122476..4123159
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AA seq
227 aa
AA seq
DB search
MSTPLTWHDVIGKEKEQPYFHETLAFVAAERQAGKTIYPPQKDVFNAFRYTELADVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLVNMYKELATDIPGFERPSHGCLQSWAEQGVL
LLNTVLTVERGQAHSHAKLGWETFTDRVIAALNDNREGVVFLLWGSHAQKKGNIIDRKRH
HVLKAPHPSPLSAHRGFLGCRHFSQANQLLEQQGLKPIDWLPQLPQA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctctcacctggcatgacgtcatcggcaaggaaaaagagcaaccctatttt
catgaaacgcttgcctttgttgccgctgaacgtcaggccggtaagaccatttatccacca
cagaaagacgtgttcaacgccttccgctacaccgaactggcagacgtgaaagtggtgatc
ctcggccaggatccttatcacggcccaaatcaagcccacggtctgtctttctcggtgctg
cccggcgtgccggctcccccttcgctggtgaatatgtataaagaattggcgacggatatc
ccggggtttgagcggccaagccacggctgcctgcaaagctgggcggaacagggcgtactg
ctgctgaacacggtattgaccgttgaacgtggccaggcgcattcccacgccaaactgggt
tgggaaacctttacggatagagtgatcgccgcgctgaacgacaaccgcgaaggcgtggtg
tttctgctgtggggctcgcatgcccagaagaaaggcaacattatcgacaggaagcgccac
cacgtgctgaaagcgccgcacccttcgccgctctcggcccaccgcggcttcctcggctgc
cgccatttctcgcaggccaaccaactgctggaacagcaggggctgaaacctatcgattgg
ctgccgcaactgccgcaggcataa
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