Streptomyces rubrolavendulae: A4G23_02400
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Entry
A4G23_02400 CDS
T04616
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
srn
Streptomyces rubrolavendulae
Pathway
srn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A4G23_02400
09124 Replication and repair
03420 Nucleotide excision repair
A4G23_02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srn03021
]
A4G23_02400
03400 DNA repair and recombination proteins [BR:
srn03400
]
A4G23_02400
Enzymes [BR:
srn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4G23_02400
Transcription machinery [BR:
srn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A4G23_02400
DNA repair and recombination proteins [BR:
srn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A4G23_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
Motif
Other DBs
NCBI-ProteinID:
AOT59558
UniProt:
A0A1D8G273
LinkDB
All DBs
Position
2837777..2839420
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHERADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDVAETMARYGRLTLSRHPVHGLVLTSTDRPVLEEVLR
SKRIKPLVGERIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHRIDLDESGWA
LRPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMARAKATTLILVTNTVSARQWKHEL
VRRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVDLTESERLAYATAETEEKYRFCATTDTKRRVTEAIVRKFAGQQILVIGQYIDQ
LDELGEHLGAPVIKGETPNAQREKLFDAFRNGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIMDA
SDLLSEA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggaccgctgatcgtccagagcgacaagacgctcctgctcgaagtcgaccacgag
cgagccgacgcctgccgccgcgccatcgccccgttcgcggagctggagcgggcgcccgag
cacatccacacgtaccgggtgaccccgctcggcctgtggaacgcgcgcgccgccgggcac
gacgcggagcaggtcgtcgacgccctcgtcgagttctcccgctacccggtgccgcacgcg
ctgctggtggacgtggcggagacgatggcgcggtacgggcggctcaccctcagccggcac
ccggtgcacgggctggtcctcacctccaccgaccgccccgtcctggaggaggtgctccgg
tcgaagcggatcaagccgctggtcggggagcgcatcgacccggacacggtcgccgtgcac
ccctccgagcgcggccagatcaagcagaccctcctcaagctgggctggcccgccgaggac
ctcgccggatacgtcgacggggaggcccaccggatcgacctggacgagtcgggctgggcg
ctgcgcccctaccagcagcaggcggtcgagggcttctggcacggcggttcgggcgtcgtg
gtgctgccgtgcggcgcgggcaagaccctcgtcggcgcgggcgcgatggcgagggcgaag
gcgacgacgctgatcctcgtcacgaacacggtctcggcccggcagtggaagcacgagctg
gtgcggcgcacctcgctcaccgaggacgagatcggcgagtacagcggcacgcgcaaggag
atccgcccggtcaccatcgccacgtaccaggtgctgacgaccaagcggaagggcgtctac
ccgcacctggagctgttcgactcccgcgactggggcctgatcgtctacgacgaggtgcac
ctgctgccggcgccggtgttcaagttcaccgccgacctccaggcacggcggcgcctcggc
ctgacggcgacgctcgtacgggaggacggccgcgagtcggacgtgttctccctcatcggc
ccgaagcggttcgacgcgccgtggaaggagatcgaggcgcaggggtacatcgcgcccgcc
gactgcgtggaggtgcgcgtcgacctcacggagtcggagcggctggcgtacgcgacggcg
gagacggaggagaagtaccgcttctgcgcgacgaccgacacgaagcgccgggtcaccgag
gcgatcgtacggaagttcgcgggccagcagatcctggtgatcggccagtacatcgaccag
ctcgacgagctgggcgagcacctgggggcgccggtcatcaagggcgagacgccgaacgcg
cagcgggagaagctgttcgacgcgttccggaacggggagatcagcgtgctggtcgtctcg
aaggtcgcgaacttctccatcgacctgccggaggcgacggtcgcgatccaggtgtcgggc
acgttcggatcgcgccaggaggaggcgcagcggctcggccgggtgctgcggccgaaggcg
gacggccaccaggcgcacttctactcggtggtggcgcgggacaccatcgaccaggacttc
gcggcccaccgccagcgcttcctggcggaacagggctacgcgtaccgcatcatggacgcg
agcgacctgctgagcgaggcgtga
DBGET
integrated database retrieval system
