Streptomyces roseicoloratus: RGF97_29425
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Entry
RGF97_29425 CDS
T09671
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sroc
Streptomyces roseicoloratus
Pathway
sroc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sroc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGF97_29425 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroc03400
]
RGF97_29425 (ung)
Enzymes [BR:
sroc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RGF97_29425 (ung)
DNA repair and recombination proteins [BR:
sroc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGF97_29425 (ung)
Prokaryotic type
RGF97_29425 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WMX48106
UniProt:
A0ABY9S2N2
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All DBs
Position
6476154..6476837
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AA seq
227 aa
AA seq
DB search
MTDTDLLPESWRGVLGEELEQPYFKELTEFVEEERARGPVFPPRDEVFAALAATPFDQVK
VLILGQDPYHGEGQGHGLCFSVRPGVKTPPSLRNIYKEMQAELGHPIPDNGYLMPWAEQG
VLLLNAVLTVRSGEANSHKGKGWEKFTDAVIRAVASRPDPAVFVLWGNYAQKKLPLIDEE
RHAVVKGAHPSPLSAKKFFGSQPFTQINAAVAAQGHAPIDWRIPDLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccgacctgctgcccgagtcctggcgcggcgtcctcggcgaagagctggag
cagccctacttcaaggagctcaccgagttcgtcgaggaggagcgggccaggggaccggtc
ttcccgccgcgcgacgaggtcttcgccgccctcgccgccacccccttcgaccaggtgaag
gtcctgatcctcggccaggacccgtaccacggcgagggccagggacacggcctgtgcttc
tccgtccgcccgggcgtcaagaccccgccctcgctgcgcaacatctacaaggagatgcag
gccgagctcggccacccgatcccggacaacggctatctgatgccgtgggccgagcagggc
gtcctgctgctcaacgcggtgctcacggtccgctccggcgaggccaactcgcacaagggc
aagggctgggagaagttcaccgacgccgtcatccgggccgtcgcctcccgccccgacccg
gccgtcttcgtgctgtggggcaactacgcccagaagaagctcccgctcatcgacgaggag
cggcacgcggtggtgaagggcgcccacccctcgccgctctcggcgaagaagttcttcggc
tcccagcccttcacccagatcaacgcggccgtcgccgcccagggccacgcgccgatcgac
tggcgcatccccgacctcggctga
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