Staphylococcus roterodami: ML435_06005
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Entry
ML435_06005 CDS
T09562
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
srot
Staphylococcus roterodami
Pathway
srot02024
Quorum sensing
srot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML435_06005 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ML435_06005 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srot03019
]
ML435_06005 (hfq)
03036 Chromosome and associated proteins [BR:
srot03036
]
ML435_06005 (hfq)
Messenger RNA biogenesis [BR:
srot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ML435_06005 (hfq)
Chromosome and associated proteins [BR:
srot03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ML435_06005 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
DUF4809
MBG
StiP
LSM
Motif
Other DBs
NCBI-ProteinID:
UMT76794
LinkDB
All DBs
Position
1286362..1286595
Genome browser
AA seq
77 aa
AA seq
DB search
MIANENIQDKALENFKANQTEVTVFFLNGFQMKGVIEEFDKYVVSLNSQGKQHLIYKHAI
STYTVESEAQASTESEE
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaacgaaaacatccaagacaaagcactagagaattttaaagcaaaccaaact
gaagtaactgtattctttctaaacggtttccaaatgaaaggtgtaattgaagaattcgac
aagtatgtcgtaagcttaaattctcaaggcaaacaacacttgatatacaaacatgcgatc
agcacttatacagtagaatctgaagctcaagcgtctactgaaagtgaagaataa
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