Serratia plymuthica AS9: SerAS9_0545
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Entry
SerAS9_0545 CDS
T01503
Name
(GenBank) transcriptional regulator, LysR family
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
srr
Serratia plymuthica AS9
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srr03000
]
SerAS9_0545
Transcription factors [BR:
srr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SerAS9_0545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_11
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEF43700
LinkDB
All DBs
Position
612821..613750
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AA seq
309 aa
AA seq
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MQVKKRALLGQLSDMDLRLLRVFKAVVDCGGMSAAELELNISLSTISKHIKDLEQRLGLT
LCQRGREGFAVTDEGLLIYQETINLLAATEAFRRGVDDVHRRMGGQLHVAIFDHTVSNPQ
AHIGRAIALFSERAPDVSLQMYVEPINTIERGVIDGQFQIGVIPMHRNAESLSYNSLFNE
RMFLYCGTQHELFSANHDMLNWDLLHHYAFAGLGYHSPNMALSLQQHLQRKATGFAQESI
ATLILSGKYVGFLPDHYAAFFVAQNMMRAIKPELFRYHCEYSCVVRRSPSPQRVVKVFHD
CLLAAHEGG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaaaaacgcgcgcttttagggcagttgtcggatatggatctgcggttgctg
cgggtgtttaaagcggtggtcgactgcggaggaatgagcgccgccgagctggagctgaat
atcagcctgtcgaccatcagcaaacatatcaaggatctggagcaaaggttggggctgacg
ctgtgccaacgcgggcgggaaggcttcgccgtcaccgacgaagggctgttgatttaccag
gaaaccatcaacctgctggcggccaccgaggcttttcgccgtggggtggatgacgtgcat
cgacgcatgggcggccagctgcacgtggcaatatttgatcatacggtcagtaatccgcag
gcgcacatcggccgggcaattgcgttattcagcgagcgtgcaccggacgtgtctttgcaa
atgtacgtggagccgataaataccattgagcgtggcgttattgacgggcagtttcagatt
ggcgttattcccatgcaccgcaatgcggaaagtttatcttataattctttattcaatgag
aggatgttcttatattgcggtacgcagcatgagttattttccgctaatcacgacatgctg
aattgggatctgttgcaccattatgcctttgcaggattgggctaccattcaccgaatatg
gcgttaagtttgcagcagcatttgcagcgcaaggcgacgggttttgctcaggagtcgata
gcgaccttaatcctctccggcaagtatgtcggctttcttcccgaccactatgcggcgttt
ttcgtcgcgcagaatatgatgcgggcgatcaaaccggagttgttccgctaccactgtgaa
tattcctgtgtggtacggcgttcacccagcccgcaacgggtggtgaaggtattccacgac
tgcctgctggcggcgcatgaggggggatga
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