Salinigranum rubrum: C2R22_02080
Help
Entry
C2R22_02080 CDS
T05289
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
srub
Salinigranum rubrum
Pathway
srub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2R22_02080 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srub03021
]
C2R22_02080 (rpoA1)
Enzymes [BR:
srub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C2R22_02080 (rpoA1)
Transcription machinery [BR:
srub03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
C2R22_02080 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUF6415
Motif
Other DBs
NCBI-ProteinID:
AUV80598
UniProt:
A0A2I8VF89
LinkDB
All DBs
Position
complement(429812..432745)
Genome browser
AA seq
977 aa
AA seq
DB search
MQTPKELGGIHFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLQCR
TCGQHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRSTCRECGRLALVEEEREEYRQQLE
RARELGEDPNDALKAAVRQARKAKHCPHPDCSAPQHDIKHEKPTTYYEVQDVLASDYSER
IAQAMQPDPDDEDDPGVAPQELANDTGIPLDRVNEILSGTFRPKSDDRKKLEKALSVDLT
EEDMNKLMPSDIRDWFEDIPDEDIAVLGIDAERARPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFIDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVAREMT
QTMNVTERNIEQARQFVRNGPEGHPGANYVRRPDGRRLKVTEKNCEELAEKVELSWEVNR
HLIDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHENPQFSETQALDLLRATS
IDELPEPEGENENGPYWTGRQLFSELLPDDLNLEFDSSAGDTVVIRDGQLVEGTVDEDAV
GAFGGEVVDTITKVYSKTRARVFINEVAALAMRAIMHFGFSIGIDDESIPEAANQQVDEA
IASAYEQIQELIEVYEQGELESLPGRTVDETLEMKIMQRLGKARDSAGEIAEDHFEDDNP
AVIMARSGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHYQKDDLSADAHGFVEN
SYRAGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGSVRDTSGT
VVQFEFGEDGTSPVKVSSKEEHSIDIENIADRVIEAEFSSEEEKDRFLGESEPPTNLSEY
AGPGLDKAQGLGVESDD
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacccaaagaactcggcgggatccacttcgggctgatggaccccgagacgtac
cgcgacatgtccgccacgaaggtcatcacggcggacacctacgacgacgacggctacccc
atcgacatggggctcatggacccccggctgggcgtcatcgaccccggcctgcagtgtcgg
acctgcggccagcactcggggtcgtgcaacggccacttcggccacatcgagctcgccgcg
cccgtcatccacgtgggcttcacgaagctcatccgacgactgctccggtcgacgtgccgc
gagtgcgggcggctcgcgctcgtcgaggaggaacgcgaggagtaccgccagcaactggag
cgggcgagggaactcggcgaggaccccaacgacgcgctgaaggcggccgtgagacaggcg
cggaaggcgaagcactgtccgcaccccgactgcagcgccccacagcacgacatcaaacac
gagaaaccgacgacgtactacgaggttcaggacgtgctcgcgtcggactactccgagcgc
atcgcccaggcgatgcagcccgaccccgacgacgaggacgaccccggcgtcgcaccccag
gaactcgccaatgacacgggcatcccgctcgaccgagtgaacgaaatcctctcggggacc
ttccgccccaaatcggacgaccgcaagaagctcgagaaggccctctccgtggacctcacc
gaggaggacatgaacaagctgatgccctcggacatccgcgactggttcgaggacatcccg
gacgaggacatcgcggtcctcggcatcgacgccgagcgggcacgccccgagtggatgatt
ctcaccgtcctgccggtgccgcccgtgacggcccgtccctccatcacgctcgacaacggc
cagcgctcggaggacgacctcacccacaagctggtcgacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaggccggcgcgccacaactcatcatcgaggacctctgggaactg
ctgcagtaccacgtcaccacgttcatcgacaacgagatttcggggacaccccccgcgagg
caccgctccggtcgccccctgaagacgctctcgcagcgcctcaaagggaaggaaggtcgc
ttccgcggctcgctgtccggaaagcgtgtcaacttctcggctcgtaccgtcatctcgccg
gacccgaccctctcgctgaacgaggtcggcgtccccgaacgggtcgcgcgtgagatgacc
cagacgatgaacgtcacggagcggaacatcgaacaggcccggcagttcgtccgcaacggc
ccagagggtcaccccggcgcgaactacgttcgaaggccggacggtcgccggctgaaggtg
accgagaagaactgcgaggaactcgcggagaaggtcgaactcagctgggaggtcaaccga
cacctgatcgacggcgacatcgtcatcttcaaccggcagccgtcgctgcaccggatgtcc
atcatggcccacgaggtggtcgtgatgccgtacaagacgttcagactcaacacgacggtc
tgtccgccgtacaacgccgacttcgacggcgacgagatgaacatgcacgcgctgcagaac
gaggaggcgcgtgcggaagcccgcgtcctgatgcgcgtccaggagcagattctctcgccc
aggttcggcgagaacatcatcggcgccatccaggaccacatctcgggcacctacctcctc
acccacgagaacccccagttctcggagacgcaggcgctcgacctcctgcgggcgacgagc
atcgacgaactccccgaacccgagggagagaacgagaacgggccgtactggaccggccga
cagctcttctccgaactgctgcccgacgacctgaacctcgagttcgactcttcggccggc
gacacggtcgttattcgggacggccaactcgtggaggggacggtcgacgaggacgccgtc
ggcgcgttcggcggggaagtcgtcgacaccatcaccaaggtgtactcgaagacgcgcgca
cgcgtgttcatcaacgaggtggcggcgctggcgatgcgcgccatcatgcacttcgggttc
tccatcggcatcgacgacgagtccatcccggaggcggcgaaccagcaggtcgacgaggcc
atcgcgtcggcgtacgaacagattcaggaactcatcgaggtgtacgagcagggcgaactc
gaatccctgcccgggcggacggtcgacgagacgctggagatgaagatcatgcagcggctc
ggcaaggcgcgcgactccgccggcgagatcgccgaggaccacttcgaggacgacaatcct
gccgtgataatggcccggtcgggcgcgcgtgggtcgatgctgaacctcacgcagatggcc
ggttgcgtcgggcaacaggcagtgcggggcgagcgcatcaaccgtggctacgaggaccgc
accctgagccactaccagaaggacgacctctcggcggacgcgcacgggttcgtcgagaac
tcctaccgcgcggggctcactccgcgggagttcttcttccacgcgatgggcggccgcgag
gggctggtcgacaccgcggtccgaacctcgaaatcggggtacctccagcgccggctcatc
aacgcgctctccgaactggaagcgcagtacgacggctccgtccgcgacacgtccggtacg
gtggtccagttcgagttcggcgaggacggcacctcgcccgtgaaggtctcctcgaaggag
gaacacagcatcgacatcgagaacatcgccgaccgcgtcatcgaggccgagttctcctcc
gaggaggagaaggaccgcttcctcggcgaatcggagccgccgacgaacctctcggagtac
gcgggaccggggctcgacaaggcgcagggcctgggggtggagtcggatgactga
DBGET
integrated database retrieval system
